Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02066 ATGAACCCGAAAATAGCCTTTCAGAATGAACTCAACTTCAAGGCAACCGAGCTCTGTTTAGGGTTGCCTGGAAGAGATGAATCTGATGATTTGTCTACCGTTAGAAACAACAAAAGGCCGTTTCCTGAAACATGCGAAGACGGTGGTGTCAGGAATGTCTCAAAAGTTCAACATGACGATGAAACTTCACCACCAGCCAAAGCACAAATAGTGGGGTGGCCTCCAGTCAGATCATTCCGTAAAAACAGCCTACAGCCAAAGAAGACTGAAACTGAGGCCTCTGGAAATTATGTGAAAGTAAGCATGGATGGAGCCCCTTACCTCAGAAAGATTGACTTGAGGGTTTACAAAGGTTATCAAGAACTTCTGAAAGCCATAGAGAACATGTTCAAGCTCACCATAGGTGATTATTCAGAAAGAGAAGGATATAAAGGATCTGAATATGCACCTACTTATGAAGATAAGGATGGTGACTGGATGCTAGTGGGAGATGTTCCATGGAACATGTTCATTACATCCTGCAAAAGACTGAGAATCATGAAAAAGTCAGAAGCTAGAGATCTGGGTTGTGGTGAATGA 579 0.4249 MNPKIAFQNELNFKATELCLGLPGRDESDDLSTVRNNKRPFPETCEDGGVRNVSKVQHDDETSPPAKAQIVGWPPVRSFRKNSLQPKKTETEASGNYVKVSMDGAPYLRKIDLRVYKGYQELLKAIENMFKLTIGDYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWNMFITSCKRLRIMKKSEARDLGCGE* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02066 192 MobiDBLite consensus disorder prediction 24 69 - -
Pte2g02066 192 Gene3D - 89 191 - -
Pte2g02066 192 FunFam Auxin-responsive protein 90 192 - -
Pte2g02066 192 Pfam AUX/IAA family 53 188 IPR033389 -
Pte2g02066 192 MobiDBLite consensus disorder prediction 28 45 - -
Pte2g02066 192 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 185 IPR003311 GO:0005634|GO:0006355
Pte2g02066 192 ProSiteProfiles PB1 domain profile. 95 182 IPR000270 GO:0005515
Pte2g02066 192 SUPERFAMILY CAD & PB1 domains 90 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02066 Pte-Chr2 40720784 40722437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02066 86 191 B3 DNA Binding Superfamily AT4G23980 34.862 5.85e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pte2g02066 AUX_IAA 5.9e-57 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02066 K14484 - qsu:112011057 299.671