Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02049 ATGCCTGTGAGGCAAATGAAGGAGAGCTCCGAGCAACATTTGGTGATCAAACCACATATGCAGAACACAAGGAATCCCGGTCAGAGAGCTCCAAAGGCTGCTCAGAATGGAAAAGGTCCACCACTGCAAGAATCTCAAAACGCCAAAAGCAATAACAACCAACAACTCTCATCTCAGACAAAAAACAGAGGTAGGAGAAGGTGTAGGGGTGGTAGGAAATCTGATCAAGGAGATGTTTCCATGCGACCCAGTTCAAGGCCTTGCACTCTGGCACACAAACCAATGTCAGCTGGTGTGGATGGGGTACTGGTAAAGAGTACTGCAAATGGACCTGTTGAAAATGGAAGCAACTCTTGTGATATGGAGATGAGTTTTCCTACTTCGAGCAAGGCTTTGAACTTCGCTCCTAGACCTGGGTTTGGACAAGCTGGGACAAAATGTATAGTGAAGGCTAACCATTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAGTATGATGTAACTATCACACCTGAAGTGTCTTCAAGAACAGTGAATAGAGCTATCATAGCTGAACTTGTGAGACTGTATAAGGAGTCAGACCTGGGAATGAGACTGCCTGCCTATGACGGTAGGAAGAGTCTTTATACAGCTGGAGAGCTACCCTTTGCTTGGAAAGAGTTTGGAATTAAACTTGCGGACGAAGATGATGGAACTCATGGACCCAAAAGGGTAAGAGAATACAAAGTAGTAATCAAGTTTGTTGCCCGAGCAAACATGCATCATTTGAGCCAGTTTTTAGCTGGAAAACGTGCCGATTGCCCTCAAGAAGCTCTTCAAATTCTAGACATTGTGTTAAGAGAACTAGCAACAAAGAGGTTTTGTCCCATCGGGAGGTCTTTCTTCTCACCTGATATCAGAAGGCCTGAACGCCTTGGTGAAGGCGTGGAATCATGGTGTGGATTTTACCAGAGCATCAGGCCTACTCAAATGGGCCTTTCCCTGAATATAGATATGGCTTCTGCCACATTTATCGAGCCTCTACCAGTAGTGGAGTTTGTTGGTCAGCTGCTAGGAAAAGATGTACTATCAAGGCCTCTCTCTGATTCTGACCGTATAAAGATTAAGAAGGCCCTCAGAGGAGTTAAAGTAGAAGTAACGCACAGAGCAAATGTAAGAAGAAAGTATCGTGTCTCTGGTTTGACTTCTCAACCTACGAGAGAACTTGTGTTTCCTGTTGATGATAATTCAACAATGAAGTCAGTAGTTGAATACTTTCAAGAAATGTATGGTTTCACCATTCAACATACTCACCTTCCTTGTCTTCAAGTGGGAAACCAGAAAAAGGCTAACTATTTACCAATGGAGGCATGCAAAATTGTTGAGGGGCAAAGGTATACCAAAAGGTTAAATGAAAAGCAAATTACTGCTCTGCTAAAGGTTACTTGCCAGAGGCCTAGGGATCGAGAAAATGACATTTTGAAGACAGTCCAACATAATGCTTATGATGAAGACATTTATGCGAAGGAATTTGGTATCAAGATTAGTGAAAAGTTAGCTTCTGTTGAGGCTCGAATTCTTCCTGCCCCCTGGTTGAAATATCATGACACTGGGAAAGAGAAGGACTGTTTACCCCAAGTTGGACAGTGGAATATGATGAACAAGAAAATGATCAATGGAATGCATGTAAGCCGATGGGCATGTATAAATTTTTCTAGAACGGTGCAAGAGGGTGTTGCCCGAGGTTTCTGTAATGAGCTAGCTCAAATGTGCCAAGTGTCTGGCATGGAATTCAATTCGGAGCCTGTCATTCCTGTATACAATGCCAGGCCTGACCAAGTAGAGAAAGCTCTAAAGCACGTTTGTCATGCTTCCATGAACAAAACTAAAGGAAAAGAGTTGGAGCTCCTATTAGCAATATTGCCGGACAACAATGGGTCTCTCTACGGTGATCTTAAACGTATTTGTGAAACCGAACTCGGTTTAATATCTCAGTGCTGCCTGACAAAGCACGTTTTCAGGATTAATAAACAATACTTAGCTAATGTGTCTCTCAAGATCAATGTTAAGATGGGAGGTCGAAATACTGTTCTTCTTGATGCCATAAGCTGCAGAATACCGTTAGTCAGCGACATACCAACCATAATATTTGGGGCAGATGTGACTCATCCTGAGAATGGAGAAGACTCTAGTCCTTCAATAGCAGCTGTAGTAGCTTCTCAGGATTGGCCTGAAGTGACAAAATATGCTGGTTTAGTCTGTGCTCAAGCTCACAGACAGGAACTGATTCAAGATTTGTACAAGACTTGGCACGATCCTGTTCGTGGCACAGTCAGCGGTGGCATGATCAGAGATCTGCTGATTTCATTTAGAAAGGCAACTGGACAGAAGCCCTTACGAATCATATTCTACAGGGATGGTGTAAGTGAGGGGCAGTTTTATCAAGTTTTGCTTTATGAGTTAGATGCAATTCGAAAGGCATGTGCGTCCTTGGAGCCAAATTATCAGCCACCTGTGACTTTCATAGTTGTTCAGAAAAGACATCACACTCGCTTGTTTGCCAACAACCATAGGGACAGGAGTAGCATAGATAAAAGCGGGAACATATTACCTGGCACTGTGGTCGATTCTAAAATCTGTCATCCAACAGAGTTTGACTTTTATCTCTGCAGCCATGCCGGTGTTAAGGGTACAAGTCGCCCAGCTCATTATCACGTTCTATGGGATGAGAACAGTTTTACAGCAGATGGACTCCAATCTCTGACCAACAACTTGTGCTATACATATGCTCGGTGCACACGCTCAGTATCTGTTGTACCTCCAGCATACTATGCACATTTGGCTGCATTTCGAGCACGTTTCTACATGGAACCAGATATGCAGGAGAATGGCTCAGCAGGGGGTGGCGCTGGTCATGGTTCGAAGGCAACAAGAGGTGCTGGAGAAATTGGTGTCAGACCTTTACCAGCTTTAAAGGAAAATGTTAAGAGAGTCATGTTCTATTGTTAG 2991 0.4356 MPVRQMKESSEQHLVIKPHMQNTRNPGQRAPKAAQNGKGPPLQESQNAKSNNNQQLSSQTKNRGRRRCRGGRKSDQGDVSMRPSSRPCTLAHKPMSAGVDGVLVKSTANGPVENGSNSCDMEMSFPTSSKALNFAPRPGFGQAGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIIAELVRLYKESDLGMRLPAYDGRKSLYTAGELPFAWKEFGIKLADEDDGTHGPKRVREYKVVIKFVARANMHHLSQFLAGKRADCPQEALQILDIVLRELATKRFCPIGRSFFSPDIRRPERLGEGVESWCGFYQSIRPTQMGLSLNIDMASATFIEPLPVVEFVGQLLGKDVLSRPLSDSDRIKIKKALRGVKVEVTHRANVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILKTVQHNAYDEDIYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMHVSRWACINFSRTVQEGVARGFCNELAQMCQVSGMEFNSEPVIPVYNARPDQVEKALKHVCHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFRINKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSIDKSGNILPGTVVDSKICHPTEFDFYLCSHAGVKGTSRPAHYHVLWDENSFTADGLQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSAGGGAGHGSKATRGAGEIGVRPLPALKENVKRVMFYC* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02049 996 Pfam N-terminal domain of argonaute 146 280 IPR032474 -
Pte2g02049 996 SUPERFAMILY PAZ domain 336 496 IPR036085 GO:0005515
Pte2g02049 996 Gene3D paz domain 336 460 - -
Pte2g02049 996 Pfam Mid domain of argonaute 539 616 IPR032473 -
Pte2g02049 996 SUPERFAMILY Ribonuclease H-like 620 952 IPR012337 -
Pte2g02049 996 Gene3D - 699 996 IPR036397 GO:0003676
Pte2g02049 996 SMART PAZ_2_a_3 346 478 IPR003100 GO:0005515
Pte2g02049 996 Pfam Argonaute linker 2 domain 482 528 IPR032472 -
Pte2g02049 996 MobiDBLite consensus disorder prediction 39 61 - -
Pte2g02049 996 SMART DUF1785_2 289 341 IPR014811 -
Pte2g02049 996 FunFam Protein argonaute-2 335 461 - -
Pte2g02049 996 SMART Piwi_a_2 630 951 IPR003165 GO:0003676
Pte2g02049 996 CDD Piwi_ago-like 501 950 IPR045246 -
Pte2g02049 996 MobiDBLite consensus disorder prediction 15 30 - -
Pte2g02049 996 Gene3D - 520 693 - -
Pte2g02049 996 ProSiteProfiles Piwi domain profile. 630 951 IPR003165 GO:0003676
Pte2g02049 996 FunFam Argonaute 10 520 693 - -
Pte2g02049 996 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 126 952 - -
Pte2g02049 996 FunFam protein argonaute 10-like 699 996 - -
Pte2g02049 996 Pfam PAZ domain 368 472 IPR003100 GO:0005515
Pte2g02049 996 ProSiteProfiles PAZ domain profile. 342 456 IPR003100 GO:0005515
Pte2g02049 996 Pfam Argonaute linker 1 domain 290 339 IPR014811 -
Pte2g02049 996 Pfam Piwi domain 631 950 IPR003165 GO:0003676
Pte2g02049 996 CDD PAZ_argonaute_like 341 455 - -
Pte2g02049 996 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02049 Pte-Chr2 40604751 40613275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02049 1 997 Eukaryotic Initiation Factors Gene Family AT5G43810 81.312 0.0 1666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02049 K11593 - cave:132176966 1810.04