Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02048 ATGCAGCTAGTTAATCAGTCCGAGGAAACGGTCGCTGAAGCTCCTGAGTTTCGAAAGAAAATCAAAGAGGAGCATTCCTTAATTCGTCCGGAGGATTGTGGAAACGCGCACGAGGATTTGGTTGTTGATGTTTCTGGGAGAAGTTTTGAATTTCCAGTGTTGAATGCATCGGAGCATACAACAGCTGGTAGTTTGTATTTGTACAAGAATGTTTATAGTTTGATTCCCAAGTCATTGGTTAAACTTGGGAGTTTGAAGACCTTGAAATTTTTTGGGAATGAGATTAATTTGTTCCCACCTGATTTTGAGACCTTTACTGGGTTGGAGTGCTTGCAAATGAAGATTTTGTCACCAGGTTTTGGTGGATTACCTTTGCATAAGTTGAAAGGTTTGAAGGAGCTTGAGCTTTCTAAAGTGCCACCTCGCCCTTCTGCTTTCCGAATAATGAGTGATATCTCCGGTCTCAAGTGCTTGACTAAGCTCTCTGTTTGTCATTTCGGTATACGATATCTCCCACCAGAAATTGGTTGTTTAAAGAATCTGGAGTATTTTGATCTTTCATTCAATAAGATAAAGACATTGCCATCTGAAATAGGTTGTTTGACTGCCGTGATGCTGTTGAAAGTGGCTAATAACAAGTTGGTTGAACTCCCTTCAGCATTGTCTTCTCTTGCACGTCTTGAGTGCTTGGACCTGTCAAATAATAAGTTGACGTCATTGGCATCGCTTGATCTTAGCATAATGCATCGACTTCAAAATCTAAATCTTCAGTGTAATAAACTTCTAAGCGCAGTACAAATACCTTCTTGGATAAACTGCAGCATGGAAGGCAATGTTGTAGACTTACGTGCCAATGATTCCAGCAGTACTTCTGTTGAGATGGAAGTATATGAAGGCAACTGGCAGGAGGATGATAGAATTCCTTCTCATAAAGGCCCTCAATGTTTGTCATCTAATTTATTGGCAAGCAACTCATCTAGCAGTAGATATTTTGGAGCCCGGAGATCAGGTAAACGTTGGAAGCGACGGAATTATTTGCAGCAAAAAGCCCGCCAAGAACGTTTAAACAACAGCAGGAAATGGAAAGGGATGGATCATTCTGAATTGTCGACTGCAAAGAGTGATGAAATTTGCAGGCTAGGTGACCACGTACTTACTTCTGAAACTTGTCTGCAAGGTAGTACAAATATAGTAGATGCCGATGAATATAACAGAAATATACTGACTGGAGAATCTAAAGACAATAATTTGGGTGATGATGTTAACATTAAAAAGGTTCATCAGATTGGTACCTTGATTGAAGCTGAAGTTTCCTCTTCCACTAGCCTTAAAACTACTTCTCAGAATATATCTGAAGGGCAGGCTAAAGTAGCCTCCTCAGATAGTGGTGGGAGTGAGCATGATGAAGGTTCTTCTGATGCTTTAAAATGTGCTTCTAAGTCAAAAAGAAATTATGAGCAGGATCTTGATAATCCTAAACCTTGCAAGTTCAGAAGACCTGTTGATGAAAGCTCTGTTCTATCCTGTAAGTATAGCAAGGATTCATTTTGTGGAACTGAGGACCATCTTCCAGATGGTTTTTATGATGCTGGACGAGATAGACCGTTTATGCCTCTTGAGAATTATGAGCAAAACCAGTGCCTTAGTGCGCGTGAAGTGATCCTATTAGACAGGGAGAAGGACGAAGAGCTGGATGCCATCACACTCTCTGCTCAAGCATTGGTGAAGCACTTGAAACAGTTGAATGAATTAACGAGATGTTGTAATCATGCTGCTGTGTATGACTTCCAAATTGCTACATTTCTTGCTTTCTTTGTATCTGATCATTTTGGAGGCAGTGACCGAAGTGGTCTTGTTGAAAAGACTCGTAAATCTGTTTCTGGTTCAAACTACCAAAAACCTTTCATCTGCACATGCTCAACTGGAAACAGTGATGGTAGTGACACCAATGGCTCCTTTCCTAAAGAAGTTGTCAAAACTGTGGATGACATTTTGTCTGATATCTGTGAAAAGTCTCTTTATTCTATCAAAAATAGGCTGAACTCTATTGTTGTTCCAATTGGAGCACTTAGATATGGGATCTGTAGACATCGAGCACTTCTCTTGAAGTATTTATGTGATCACATGGAGCCACCTATTCCTTGCGAGCTTGTTAGAGGTTATCTGGATTTTTCCCCTCATGCCTGGAATGTTGTTCCCATTCAAAAGGGTGATAAGTTGGTTCGCATGTTAGTAGATGCTTGTCGTCCCCATGACATTAGAGAAGAGACAGACTCAGAATATTTTTACCGATATATTCCACTTAGTCGTTCCAAAGTTCCTCTTTCAACAGGCAGCAATGCTAGCCCTAGTTGTTCCTTTCCATCAATGACCAGCGGTGATGAAATTGAGAAAGGACCTTCTAGTACATTAGTCCGGTCTAGATGGGGATCACTTGAGGTGGCAGTAAAGGTGCGAAAGTTGGAAGTGAATGGGAGTTCAGCTGATGAGATAAGGAACTTTGAATACAATTGTCTCGGAGAAGCTAGAATTTTAAGTGCTTTAAAACACTCATGTATAGTTGAACTGTATGGGCACCATCTATCTTGCAAGTGGACCCCTTTGGTGGATGAACACCAAAATCATCGTACGTTACAATCTGCAATAGTCATGGAATATGTGAAAGGTGGATCTTTGAAGAGGTACCTAGAGAAGCTACTAAAGACTGGTGAGAAACATGCTCCATTGGACCTGGCAATGAGTGTTGCCAGAGATGTTTCATGTGCCCTGGCAGAGCTGCATTCTAAACACATCATTCATCGTGATATAAAGAGTGAAAACATTTTGATTGATTTGGATTGTAGAAGAGATGATGGAACTCCCATTGTCAAGCTTTGCGATTTTGATAGAGCAGTGCCACTAAGGTCAATGTTGCATACATGCTGCATTGCTCACAAGGGAGTGCCTACTGCTGATGTATGTGTTGGGACTCCTCGATGGATGGCACCAGAAGTAATGCGAGCAATGTATAAACCAAATGCTTATGGAGTGGAAGTGGACATTTGGTCGTATGGGTGTTTAATTCTTGAACTGCTGACACTAAAAGTTCCTTATTCTGGTTTTCCTGAGAGTCACATCCATGATCATCTTCAGGAGGGGAAAAGGCCTCGGTTAACTGATGAGCTGGAGTCCTTGGACTCCTTTGAGCGGCCTACCGTGTCTCCATCTAATAATTACCACGAACCATCGGATGAGGAGACCATTAAATTTCTTGTCGATTTGTTCCGTAGGTGTACAGAACGAATTCCAACTAAACGTCCAGCAGCACAAGACATCTACAAAATGGTCGTTGCGCAAATGAGGTGTTCTGTAGGTTCAAGTATTGAATGA 3369 0.4129 MQLVNQSEETVAEAPEFRKKIKEEHSLIRPEDCGNAHEDLVVDVSGRSFEFPVLNASEHTTAGSLYLYKNVYSLIPKSLVKLGSLKTLKFFGNEINLFPPDFETFTGLECLQMKILSPGFGGLPLHKLKGLKELELSKVPPRPSAFRIMSDISGLKCLTKLSVCHFGIRYLPPEIGCLKNLEYFDLSFNKIKTLPSEIGCLTAVMLLKVANNKLVELPSALSSLARLECLDLSNNKLTSLASLDLSIMHRLQNLNLQCNKLLSAVQIPSWINCSMEGNVVDLRANDSSSTSVEMEVYEGNWQEDDRIPSHKGPQCLSSNLLASNSSSSRYFGARRSGKRWKRRNYLQQKARQERLNNSRKWKGMDHSELSTAKSDEICRLGDHVLTSETCLQGSTNIVDADEYNRNILTGESKDNNLGDDVNIKKVHQIGTLIEAEVSSSTSLKTTSQNISEGQAKVASSDSGGSEHDEGSSDALKCASKSKRNYEQDLDNPKPCKFRRPVDESSVLSCKYSKDSFCGTEDHLPDGFYDAGRDRPFMPLENYEQNQCLSAREVILLDREKDEELDAITLSAQALVKHLKQLNELTRCCNHAAVYDFQIATFLAFFVSDHFGGSDRSGLVEKTRKSVSGSNYQKPFICTCSTGNSDGSDTNGSFPKEVVKTVDDILSDICEKSLYSIKNRLNSIVVPIGALRYGICRHRALLLKYLCDHMEPPIPCELVRGYLDFSPHAWNVVPIQKGDKLVRMLVDACRPHDIREETDSEYFYRYIPLSRSKVPLSTGSNASPSCSFPSMTSGDEIEKGPSSTLVRSRWGSLEVAVKVRKLEVNGSSADEIRNFEYNCLGEARILSALKHSCIVELYGHHLSCKWTPLVDEHQNHRTLQSAIVMEYVKGGSLKRYLEKLLKTGEKHAPLDLAMSVARDVSCALAELHSKHIIHRDIKSENILIDLDCRRDDGTPIVKLCDFDRAVPLRSMLHTCCIAHKGVPTADVCVGTPRWMAPEVMRAMYKPNAYGVEVDIWSYGCLILELLTLKVPYSGFPESHIHDHLQEGKRPRLTDELESLDSFERPTVSPSNNYHEPSDEETIKFLVDLFRRCTERIPTKRPAAQDIYKMVVAQMRCSVGSSIE* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02048 1122 MobiDBLite consensus disorder prediction 438 461 - -
Pte2g02048 1122 ProSiteProfiles Protein kinase domain profile. 790 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02048 1122 Gene3D Phosphorylase Kinase; domain 1 783 872 - -
Pte2g02048 1122 Pfam Protein kinase domain 806 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02048 1122 Gene3D Ribonuclease Inhibitor 30 296 IPR032675 -
Pte2g02048 1122 ProSiteProfiles Leucine-rich repeat profile. 180 201 IPR001611 GO:0005515
Pte2g02048 1122 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 108 1116 - -
Pte2g02048 1122 SMART LRR_typ_2 224 247 IPR003591 -
Pte2g02048 1122 SMART LRR_typ_2 82 104 IPR003591 -
Pte2g02048 1122 SMART LRR_typ_2 178 201 IPR003591 -
Pte2g02048 1122 MobiDBLite consensus disorder prediction 438 475 - -
Pte2g02048 1122 Pfam Ethylene-responsive protein kinase Le-CTR1 662 746 - -
Pte2g02048 1122 ProSiteProfiles Leucine-rich repeat profile. 226 247 IPR001611 GO:0005515
Pte2g02048 1122 Gene3D Transferase(Phosphotransferase) domain 1 875 1116 - -
Pte2g02048 1122 FunFam Leucine-rich repeat protein kinase family protein 836 1115 - -
Pte2g02048 1122 SMART LRR_sd22_2 178 200 - -
Pte2g02048 1122 SMART LRR_sd22_2 224 245 - -
Pte2g02048 1122 SMART serkin_6 790 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02048 1122 SUPERFAMILY L domain-like 64 284 - -
Pte2g02048 1122 SUPERFAMILY Protein kinase-like (PK-like) 785 1109 IPR011009 -
Pte2g02048 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 931 943 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02048 Pte-Chr2 40588905 40595974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02048 793 1053 MAP Kinase Kinase Kinase AT3G50720 31.343 5.52e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Pte2g02048 Pkinase 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02048 - - qsa:O6P43_021520 1367.06