Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02043 ATGGAAGCCGGCACTGCCACTTTCCGCTCTATCCTCGACAAACCCCTCAACCAACTCACGGAAGATGACGTTTCTCAGCTCACCCGTGAAGACTGTCGCAAATTCCTTAAAGATAAAGGTATGAGAAGGCCGTCATGGAACAAATCACAGGCGATCCAGCAGGTTATCTCATTGAAAGCTTTGCTGGAACCTTCTGACGACGATTCTGGCGCCGGGTATTTGCGGAAGCTCGCTTTTGCTTCATTACCTCAACATAATAGTACTCCACAAGGGAACTTGGTATCTGCAAATTGTGTTAAAGGACCTAATAGTGATGCAAAACTCTTGGAACCAGCTGAAGAATCAGTGTTACAAAAATTGGAAGAAGCAAGCAAATCGGGTTCATCTGGGGACAGTCCAGCTGGTGTTGACATCAATGAGAATGCCGTCAGCCCAAGGGCGTGTGCAACTAGTGCCTCAATCGGACAAATGACAATTTTCTATTGTGGCAAGGTAAACGTGTATGATAGAGTACCCCTTGATAAGGCACAGACGATCATGCAGCTGGCAACCAGTCCACTCCATTCACTGCAGAATGACTCATTGAATAACAGTGCTGTAGCAAAGACTTCTCTGTGTCACTCACAGACAGTAGCTAGACGAGAGGCTCCTGTTCATCAGGAGGCCACAATCTCCCAAAGAGCTCAACCAGATATAGAGGGTCAGGCTAGCAGAAAGGTGTCAGTGCAGAGATATCTTGAAAAGAGAAAGGACAGGGAACGGCTAAAGAACAAGAAAATTGCAGGATCTAGAACGTCAAGCTTGGAGATTTTGAACGACCAACTAAGATCGAATGCCTCAAATAGGAATTCAGGCCGTAGTAGTACCAATTCTCCAACTCAGCCTACAATGCCACAACTTCAGGTAGCTGGACCGACAATCAGCTCAAGGTTGCTCTTACAGTAG 945 0.4646 MEAGTATFRSILDKPLNQLTEDDVSQLTREDCRKFLKDKGMRRPSWNKSQAIQQVISLKALLEPSDDDSGAGYLRKLAFASLPQHNSTPQGNLVSANCVKGPNSDAKLLEPAEESVLQKLEEASKSGSSGDSPAGVDINENAVSPRACATSASIGQMTIFYCGKVNVYDRVPLDKAQTIMQLATSPLHSLQNDSLNNSAVAKTSLCHSQTVARREAPVHQEATISQRAQPDIEGQASRKVSVQRYLEKRKDRERLKNKKIAGSRTSSLEILNDQLRSNASNRNSGRSSTNSPTQPTMPQLQVAGPTISSRLLLQ* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02043 314 Pfam Jas motif 235 252 IPR018467 -
Pte2g02043 314 SMART tify_2 150 185 IPR010399 -
Pte2g02043 314 MobiDBLite consensus disorder prediction 211 244 - -
Pte2g02043 314 ProSiteProfiles Tify domain profile. 150 185 IPR010399 -
Pte2g02043 314 MobiDBLite consensus disorder prediction 261 314 - -
Pte2g02043 314 MobiDBLite consensus disorder prediction 119 138 - -
Pte2g02043 314 MobiDBLite consensus disorder prediction 121 135 - -
Pte2g02043 314 MobiDBLite consensus disorder prediction 257 314 - -
Pte2g02043 314 Pfam tify domain 156 183 IPR010399 -
Pte2g02043 314 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 254 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02043 Pte-Chr2 40562211 40566769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02043 1 311 Tify Gene Family AT4G14720 45.783 8.92e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte2g02043 tify 2.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02043 - - qsa:O6P43_003318 328.946