Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02040 ATGGGGAAAACAAGCAAGTGGATAAGGAACTTCTTGACAGGAAAGAAAGACAAGGTACAAGACAAAGAGAAGGAAAAGGTAGGGACTGGAATGGATCAGAGTTCAACAAGTACGGTTGAAAATCCGACAACGCAGACACCACCAAAAGAGAAAAGGAGATGGAGTTTTCGGAGGTTGTCAGCATCAGAAACAGCTTCCAGAGAGTTAAATTCTACTGAATCGAATAGCTCCAAAGCAAGGACAGGACATACAACATGTAAAGCTGAAAATGATCAGAGAGAGCATACTACGGCTGTAGTGGCAGCCACAGCGGCTGCCGTCACCTTGATCCCCCTAACTTCCAGCTCTAATAGGACCGGCATTTCCATTGAAGCTGCTGCTGCTATTAGAATTCAATCTGTGTTCAGGTCTCACTTGGCTAGAAAAGCACTGTGTGCTCTCAAGGGGTTGGTGAAGTTGCAAGCGTTAGTAAGAGGTCACCTCGTAAGGAAACAGGCCACGGCTACACTGAGATGCATGGAGGCTCTAGTGTCAGCTCAAGCAAGAGTTCGGGCACAGAGGATCAGGTTGTCTGAAGATGTCGAGCTAAATCAAAGGCACTCAATACACAGAAAATCTACACAGGAGAATAGGTTCGGGATCTTGAATCAGGTAATGGAAGGAAGCATGGAGGAGAACATCAAGATTGTAGAGATGGATTATGGAGAATCAAATGGTAACTCTAGAAGTAGGAGGAACTGCTTAAAATTCCTACAACATGAGTGTTCTACTCAAGGAATTCCTGCACATTATGCAGCTCAACCTTCGAATTTGAAGCAAGCAAACAATAAGTTCTTGCCAGCTCAATCAGCTCTGACAGACTACAGTCCAAGAGCATGCAGTGGACATTTTGAGGACTATTCATTGAGCACAGCACAAAGCAGTCCACAGCACTACTCTGCATTGTCCAAATCCAATGATTTTAGAGTTCCTTTTGCTTATACAGAACAAATGGATTGTGTGTACCCCTTATATCCAAATTACATGGCCAACACAGAATCATCAAGAGCTAAGGTTCGTTCTCAGAGTGCACCAAAGCTAAGGCCTGCTTCTTGTGAGAGGCAGCCAATTCGTCGGAGAGTGTCTGTTGAAGGAAGAAATGTGCCAAGAGGAATGAGGATGCAGAGGTCATCTTCACATCTTGGCTCCACAGCTAAAAACTATCAATACCCTTGGTCACAGAGGCTTGACAGGTCAACTGTCTCGGTCATAGATAGTGAGTGTGGCTCTACTAGTACTGTGCTCACAAATACCAATTATTGCAGATCTCTTGTTGTATATGATGTAAGTATTTTTACATCTCAACGAATTTCATTGCAAATGCCAAATAGAGACAAGAAAAAACAATCAGGGAATCTATCTCCCTTTTCCCCCTCCAATTATAGCCAATATATGATGACATGTTCACATTTCTTGCAAATTTCTGCAGCATCGTGGAGATCGATATTGTGA 1491 0.4339 MGKTSKWIRNFLTGKKDKVQDKEKEKVGTGMDQSSTSTVENPTTQTPPKEKRRWSFRRLSASETASRELNSTESNSSKARTGHTTCKAENDQREHTTAVVAATAAAVTLIPLTSSSNRTGISIEAAAAIRIQSVFRSHLARKALCALKGLVKLQALVRGHLVRKQATATLRCMEALVSAQARVRAQRIRLSEDVELNQRHSIHRKSTQENRFGILNQVMEGSMEENIKIVEMDYGESNGNSRSRRNCLKFLQHECSTQGIPAHYAAQPSNLKQANNKFLPAQSALTDYSPRACSGHFEDYSLSTAQSSPQHYSALSKSNDFRVPFAYTEQMDCVYPLYPNYMANTESSRAKVRSQSAPKLRPASCERQPIRRRVSVEGRNVPRGMRMQRSSSHLGSTAKNYQYPWSQRLDRSTVSVIDSECGSTSTVLTNTNYCRSLVVYDVSIFTSQRISLQMPNRDKKKQSGNLSPFSPSNYSQYMMTCSHFLQISAASWRSIL* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02040 496 PANTHER IQ-DOMAIN 5-RELATED 1 377 - -
Pte2g02040 496 Gene3D - 124 177 - -
Pte2g02040 496 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Pte2g02040 496 Pfam IQ calmodulin-binding motif 151 165 IPR000048 GO:0005515
Pte2g02040 496 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Pte2g02040 496 MobiDBLite consensus disorder prediction 1 93 - -
Pte2g02040 496 MobiDBLite consensus disorder prediction 30 45 - -
Pte2g02040 496 Pfam Protein of unknown function (DUF4005) 299 380 IPR025064 -
Pte2g02040 496 MobiDBLite consensus disorder prediction 59 83 - -
Pte2g02040 496 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Pte2g02040 496 MobiDBLite consensus disorder prediction 10 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02040 Pte-Chr2 40536958 40539278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02040 1 448 IQD Protein Family AT4G14750 44.492 5.01e-92 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02040 - - tcc:18603043 490.73