Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte2g02038 | ATGGCGGTAGGCAAGAACAAGCGTATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAGGCCGCTGATCCTTTTGCCAAGAAAGACTGGTATGACATTAAGGCTCCTTCCGTGTTCCAAGTGAAGAATGTGGGAAAGACCCTCGTTACCCGTACTCAGGGTACGAAGATCGCATCCGAAGGACTTAAGCACAGGGTCTTTGAGGTTTCACTGGCTGATCTTCAAGCTGATGAGGACCATGCCTACAGGAAGATCAGATTGAGGGCTGAGGATGTTCAGGGGAGGAACGTCCTGACAAATTTCTGGGGAATGGATTTCACAACTGACAAGCTGAGGTCATTAGTGCGTAAATGGCAAACTCTGATTGAAGCCCATGTGGATGTGAAGACTACTGACAATTACACCTTGAGGATGTTCTGTATTGGTTTTACCAAGAGACGTGCTAACCAGACTAAGAGGACCTGTTATGCACAATCCAGCCAAATCAGACAGATCCGCCGAAAGATGAGAGAAATAATGATTAATCAAGCAACATCTTGCGATTTGAAGGAGTTGGTCCGTAAGTTTATTCCAGAGATGATTGGAAAAGAAATTGAGAAAGCAACATCCAGCATCTACCCATTGCAGAATGTATTTATTAGAAAAGTCAAGATCTTGAAAGCTCCGAAGTTTGATCTCGGGAAGCTGATGGAGGTTCACGGTGACTATTCCGAAGATATTGGACAAAAGGTAGAGAGGCCTGCCGATGAAACCTTGGCTGAACCCACTGAGATCGTTGGAGCTTGA | 783 | 0.4547 | MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQADEDHAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQTKRTCYAQSSQIRQIRRKMREIMINQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDIGQKVERPADETLAEPTEIVGA* | 261 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte2g02038 | 260 | SMART | Ribosomal_S3Ae_2 | 15 | 221 | IPR001593 | GO:0003735|GO:0005840|GO:0006412 | |
Pte2g02038 | 260 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Pte2g02038 | 260 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Pte2g02038 | 260 | ProSitePatterns | Ribosomal protein S3Ae signature. | 61 | 73 | IPR018281 | GO:0003735|GO:0005840|GO:0006412 | |
Pte2g02038 | 260 | Pfam | Ribosomal S3Ae family | 16 | 221 | IPR001593 | GO:0003735|GO:0005840|GO:0006412 | |
Pte2g02038 | 260 | PANTHER | 40S RIBOSOMAL PROTEIN S3A | 1 | 253 | - | - | |
Pte2g02038 | 260 | Hamap | 40S ribosomal protein S1 [RPS3A]. | 1 | 258 | IPR027500 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte2g02038 | Pte-Chr2 | 40528757 | 40530576 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte2g02038 | 1 | 261 | Cytoplasmic Ribosomal Protein Gene Family | AT4G34670 | 86.312 | 1.87e-163 | 451 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte2g02038 | K02984 | - | qsa:O6P43_003325 | 458.373 |