Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02037 ATGGCTCTCAGAGCAACGAAGTATTGGAGATCCATGCTGATCAATAGATCGGATGGAGGAAGCCACTCGTTCACTTATCCCACCATTCCAAAAATGAAATCCTATTCAACGGCAGCAGGCTCTCCTCAAAGTGATCAAACTAGTACTTTAAGGAGCTTGGCAATGAAAGGAGAGTATGCACCCATCTACGTCGTGATGGGATTTGTGATGGTAGCTGTGACAATAGCAGCCCATACAGCCAAACAGCATCTTGTCCATGCTCCTGGTGTTGCCATCACCAAAAAGAGAAGAGGGAGTATTTCGGAGGCGGATGACCCTGACGTGACTGTCACCTCCGCCAACAAATTCCTCAACAAGTCTTTCCTAAGAAAGATAGCTCATATCCAAGAGAACAAGGCCACTCTGCCCGACTCTCGTCCAGATCAATTTGCCACAGTAAGAACAAATATTTTACAGGAAAGAGAGGACATCGACTCTTCATCTATTTATGTTAAAAGCAACATATGTAAGAGAAAAAATACAAGGAAACAAAAACATGGTAGAGAGAATAGTGGTAGGGACGTAGTTATCCTCACGAGAAAATCAACTCCCGCCTTCCCGCTTCTTGAATCTTTGTTCTCTTCTCCTGTATTCCCTTGGATTCGTGAGTCGCCGGTCTTCAGCTATATCAACAATCTCTCTCCTATCAAACCGGTTAAGTCTGTGCATGTAACTCAGACATTCAACTCGCTTAGCTTTTCATCTCCTCTTTCCGTTTTTACATCACCCCAGGTCAGCTCACACAGAGTCTCCAGATTTCTCAAAAGCCACAACATTGCAGATCTATCGAAGATTGAATTATCCACAGAAGATGTTACTATAGATGCAATCAGTACCCATATTGACTCAAATGAAGAGGAGGACGAAACTGGTATAAGGGTGTTAATAGCAGACGCTTCTATACAGCTACCTAAAGAAGATACTGATTTCACAATTGAGCTACCAAAGGAATTGAGGTATGAGTCTGGTAGCCCTGATTGTGAAAAGACAACCTTTTGTGGATATGAGAATAGTTCTGCATTGCAATTACCTAGCAAAGAAGTATCATTGGTTGCGTCAGTTCCAGGAGCTGAAAATGTGCCATCTGAAGAGGAAGTACAAGTGGTGCAGATATCAGACATTTGTTGTGTTGAGCCAAAAGCGGAAAGTGCAGAATGCAATTGGGAGGGTTTAATTGCAGATGCTTCTGATATTCTAATTTTTAATTCCCCTAATGACACAGAAACTTTCAAGGGTTTCATCCAAAGGCCCTTCGATCCTGCTATGCAATTTTGCACCATTGTATCGCAGCTATCACCCAGTGACATTAATGGCCAGAAGTTACAAGTTGTAGATCAGACAACATCTTCACAGCGTATAACTGATTGCCATTCTTATCATCCTGAAACAGCGTGTGAGCAGATAGAAGTTCACCAGAGTCTCCACTCAAGGGACTATCGGAATGTTGGGATGATCGATGCCAACATAAGTGGGCAAGATAACAAGCCTGTCTTCATCATGCGTCATGGCTTCCGAAGGCGCTGTCTAGATTTTGAAATGACTGGAGGCTGGAAGAAGACCCCGGGTGAGGGTTCAAGTAGTGGTACTTGCGTTTCTCAATCCGATGAGAAAATTACAACTAACGATATGCAAGTAGTCCCTTTAAAACAAATTTCAGATTCACAAAAGTGCATTTTGCCTGGAATTGGACTGCACTTAAATTCACTTGCTATGCTGAGAGATCACAGAGACAACAGCCATGGAAGTTGGCAAAGCTCATGTTCTAGTATACAGCTGCCGGGAAAAAGTCAAGAACATCTATTGTCTGTTTTAACACCTCCTGAAAGAGACATAGATACTAACGAGAATGAAGATCAACTGGCAGAAGATGGTTCTCAGCCATCAGCTTATTCGCTCGCTGAAGATTACAGTCAGAACAGCCCCAGAAGGAAAAGATCCAAATTAGAAGTTGGGGGAGAAAGTGATGGCTGCAAGCGATGTAACTGTAAGAAATCGAAGTGTCTGAAGCTGTACTGCGATTGCTTTGCTGCTGGCATTTACTGCATAGAACCTTGCACTTGTCAAGATTGCTTCAATAAGCCTATTCACGAAGATAAAGTTCTTGAAACTCGCAAGCAGATTGAGTCTCGCAATCCCCTTGCATTTGCTCCAAAAGTAATCAGGAGCTCAGATTATGTTCCTGAAATAGGGGATGAATCAGACAAAACCCCAGTCTCAACACGCCACAAAAGGGGATGCAACTGCAAGAAATCAAACTGCCTAAAGAAATACTGTGAATGCTATCAGATGTCAGTTGGCGCATTTCCTTTGAAGGGCGGTGTTGGATGCTCCATTAACTGCAGATGTGAAGGGTGCAAGAATAAATTTGGTACTAAGGATGGTTCTTTTCCCAATTGTATTGAAACTGAACCAGAGGAAACAGGAACGTGTGAAAATAGTACAGTAGAAAAACGATTAAAGAAGATGAATCTCCAGAATAATGAAGAGCATTTGGCTGCAACCCCACTACGATCACTAGTTCCTTTGTCCTTTTCGTCCAAAGGAAAACCATCAAGATCTTCTTTTATTACTAGAGGATTGTATGCCGGCAATCGACTAGGGAAATCACATGTTATTTCACAACAGAAACTGGTCAAGCATTTAGAAACAGTTCCAGATGGTGAAATACCAGAGGTTCTGAGAAGGGACTGGTCTCCTGTCAACTGTATGAAAACTTCTCAAAATGGCAAGAGAGTGTCCTCTCCTCACTCTAATTTTGCAGGATCTCCTACTCGGAGGAGTGGCAGGAAGTTGATATTACAATCAATTCCCTCATTTCCATCTCTCACTTAG 2871 0.4256 MALRATKYWRSMLINRSDGGSHSFTYPTIPKMKSYSTAAGSPQSDQTSTLRSLAMKGEYAPIYVVMGFVMVAVTIAAHTAKQHLVHAPGVAITKKRRGSISEADDPDVTVTSANKFLNKSFLRKIAHIQENKATLPDSRPDQFATVRTNILQEREDIDSSSIYVKSNICKRKNTRKQKHGRENSGRDVVILTRKSTPAFPLLESLFSSPVFPWIRESPVFSYINNLSPIKPVKSVHVTQTFNSLSFSSPLSVFTSPQVSSHRVSRFLKSHNIADLSKIELSTEDVTIDAISTHIDSNEEEDETGIRVLIADASIQLPKEDTDFTIELPKELRYESGSPDCEKTTFCGYENSSALQLPSKEVSLVASVPGAENVPSEEEVQVVQISDICCVEPKAESAECNWEGLIADASDILIFNSPNDTETFKGFIQRPFDPAMQFCTIVSQLSPSDINGQKLQVVDQTTSSQRITDCHSYHPETACEQIEVHQSLHSRDYRNVGMIDANISGQDNKPVFIMRHGFRRRCLDFEMTGGWKKTPGEGSSSGTCVSQSDEKITTNDMQVVPLKQISDSQKCILPGIGLHLNSLAMLRDHRDNSHGSWQSSCSSIQLPGKSQEHLLSVLTPPERDIDTNENEDQLAEDGSQPSAYSLAEDYSQNSPRRKRSKLEVGGESDGCKRCNCKKSKCLKLYCDCFAAGIYCIEPCTCQDCFNKPIHEDKVLETRKQIESRNPLAFAPKVIRSSDYVPEIGDESDKTPVSTRHKRGCNCKKSNCLKKYCECYQMSVGAFPLKGGVGCSINCRCEGCKNKFGTKDGSFPNCIETEPEETGTCENSTVEKRLKKMNLQNNEEHLAATPLRSLVPLSFSSKGKPSRSSFITRGLYAGNRLGKSHVISQQKLVKHLETVPDGEIPEVLRRDWSPVNCMKTSQNGKRVSSPHSNFAGSPTRRSGRKLILQSIPSFPSLT* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02037 956 ProSiteProfiles CRC domain profile. 669 803 IPR005172 -
Pte2g02037 956 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 671 706 IPR005172 -
Pte2g02037 956 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 757 801 IPR005172 -
Pte2g02037 956 MobiDBLite consensus disorder prediction 651 669 - -
Pte2g02037 956 MobiDBLite consensus disorder prediction 633 650 - -
Pte2g02037 956 MobiDBLite consensus disorder prediction 621 669 - -
Pte2g02037 956 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 211 956 IPR044522 GO:0003700
Pte2g02037 956 MobiDBLite consensus disorder prediction 918 940 - -
Pte2g02037 956 SMART CXC_2 668 709 IPR033467 -
Pte2g02037 956 SMART CXC_2 754 804 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02037 Pte-Chr2 40520250 40527779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02037 214 955 CPP Transcription Factor Family AT3G22780 38.175 4.54e-133 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte2g02037 TCR 3.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02037 - - qsa:O6P43_003327 792.341