Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02028 ATGGACGCCTCACCACAAAGTTGGGTTCCTGAATTGGAATCAGAGGATGATGATAATTTCACCGATCAAGGCGATCTGAACTCTTCCGATCTTCAAGTTGATGATTATGACACAGAAACCTCATCACAGAAGACACCAAGTTCAGATTATTACAATCAGAAACTGATTGATCTTTCAGCCCTTATCCCCAGTTCAAACAAGATAGACGAGGTTTCTGTTATTTCGAAGACTATCGAGTACTTGAAGGAGCTTCATGAAACTATTGCGTTGTTGGAAGATAAGGTGGGGATGAACCGTGATGAGGCAGTTCCATCGAACAAGCAATCTGAAGTGTCGACTGAGAAAGATGTCTCTTCCAATAGCAAGATTGAAGAAAACACTGGTCCCGAGATCGGTACTTCCAGTGCGATACTAACAGAAATAGAAGCAAGATTCCTGAAAAAAGATGTGCTTGTTCGGATCCACTGCATGAAATCGAAAGGACTGGTCGTCAAAATTCTTAGCCTCATGAAAGATATCCATCTATCTGTAATCCGCAACAGTGTTCTTCGTTTTGGAGACTCCCATTTCGAGATAAGCATTGTTGCCCAGGCAAGTACATACTAG 606 0.4208 MDASPQSWVPELESEDDDNFTDQGDLNSSDLQVDDYDTETSSQKTPSSDYYNQKLIDLSALIPSSNKIDEVSVISKTIEYLKELHETIALLEDKVGMNRDEAVPSNKQSEVSTEKDVSSNSKIEENTGPEIGTSSAILTEIEARFLKKDVLVRIHCMKSKGLVVKILSLMKDIHLSVIRNSVLRFGDSHFEISIVAQASTY* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02028 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 97 IPR036638 GO:0046983
Pte2g02028 201 MobiDBLite consensus disorder prediction 1 49 - -
Pte2g02028 201 Gene3D - 49 130 IPR036638 GO:0046983
Pte2g02028 201 PANTHER BHLH TRANSCRIPTION FACTOR 52 198 - -
Pte2g02028 201 MobiDBLite consensus disorder prediction 102 128 - -
Pte2g02028 201 MobiDBLite consensus disorder prediction 24 49 - -
Pte2g02028 201 MobiDBLite consensus disorder prediction 101 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02028 Pte-Chr2 40449266 40450801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02028 53 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 33.793 9.81e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02028 - - jre:108985363 119.398