Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02027 ATGAAGGAATCAGAGGATAATGATAATTTCACCGATCAAGGTGATCTGAACTCTTCTGATCTTCAAGTTGATGATTATGACACAGAAACCTCATCACAGAAGACATCAAGTTCAGATGAATTCAATCAGAAACTGGTTGATCTTTCAGCCCTTATCCCCAATTCAAACAAGATAGACGAGGTTTCTGTTATTTCGAAGACTATCGAGTACTTGAAGGAGCTTCATGAAACTATTGCGTTGTTGGAAGATAAGGTGGGGATGAACCGTGATGAGGCAGTTCCATTGAGCAAGCAATCTGAAGTGTCGACTGAGAAAGATGTCTCTTCCAATAGCAAGATTGAAGAAAACACTGGTCCCGAGATCGGTACTTCCAGTGCGATACTAACAGAAATAGAAGCAAGATTCCTGAAAAAAGATGTGCTTGTTCGAATCCACTGCATGAAATTGAAAGGACTGGTCGTCAAAATTCTTAGCCTCATGAAAGATATCCATCTAACTGTGATCCGCAACAGTGTTCTTCGTTTTGGAGACTCCCATTTCGAGATAAGCATTGTTGCCCAGGCAAGTACATAG 573 0.4084 MKESEDNDNFTDQGDLNSSDLQVDDYDTETSSQKTSSSDEFNQKLVDLSALIPNSNKIDEVSVISKTIEYLKELHETIALLEDKVGMNRDEAVPLSKQSEVSTEKDVSSNSKIEENTGPEIGTSSAILTEIEARFLKKDVLVRIHCMKLKGLVVKILSLMKDIHLTVIRNSVLRFGDSHFEISIVAQAST* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02027 190 Gene3D - 38 84 IPR036638 GO:0046983
Pte2g02027 190 PANTHER BHLH TRANSCRIPTION FACTOR 40 188 - -
Pte2g02027 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 39 88 IPR036638 GO:0046983
Pte2g02027 190 MobiDBLite consensus disorder prediction 93 118 - -
Pte2g02027 190 MobiDBLite consensus disorder prediction 95 118 - -
Pte2g02027 190 MobiDBLite consensus disorder prediction 11 40 - -
Pte2g02027 190 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02027 Pte-Chr2 40427274 40428236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02027 39 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 34.228 7.94e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02027 - - qsu:112029780 120.168