LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g02025	ATGGATGTTGGTGCAAATGACGAGGCAGAGTACTCAGACTTTGTGGAAGTTGATCCTACTGGAAGATATGGAAGATATAATGAAATTCTCGGAAAAGGGGCTTCAAAAACAGTCTATAGAGCCTTTGATGAATACGAAGGAATTGAAGTGGCCTGGAATCAGGTGAAGCTTTATGACTTTCTGCAGAGCCCTGAAGATCTTGAGAGGCTTTATTGTGAAATTCATCTCCTTAAAACCTTGAAACATGAGAACATCATGAAGTTCTACACTTCCTGGGTTGATACAACCAATAGGAACATTAACTTCGTCACTGAAATGTTTACTTCTGGAACTCTCAGGCAGTACAGGCTGAAACATAGAAATGTTAACGTCAGAGCTGTAAAGCATTGGTGTAGGCAAATTTTGAAAGGCCTGCTTTATCTCCACAGTCATGACCCGCCTGTAATCCACAGAGATCTTAAGTGTGATAATATTTTCATTAACGGCAACCAGGGGCAAGTCAAGATTGGTGATCTTGGCCTTGCTGCAATTCTCAGACAATCTCACGCTGTTCGCTGTGTCGGGACACCGGAGTTCATGGCTCCTGAAGTGTATGCAGAGGAGTATAATGAATTGGTGGATATATATTCATTTGGGATGTGTATCTTGGAGATGGTCACCTATGAATATCCGTACAGTGAATGTAATCATCCTGCACAAATCTACAAGAAAGTTATTTCAGGAAAGAAACCAGAAGCTCTGTACAAAGTGAAGGATCCTGAAGTGCGCCAATTTGTTGAAAAATGCTTAGCAACTGTCTCCCTCAGACTGTCAGCCAGGGAACTCCTGCAAGATCCTTTTCTCCAAATTAATGACTACGGATTCATTATGAACACTCTACAATATGAACTAGATTGCAGTTATTCTGGACAGCCTGGTAATGGAATTCATGAAAGTAGTGACTGTGGTGGTTACTGTGCAATTGAACCTGAAAGCGAATTCGATTACCATAAGATTGATGATGATCTCTTCGGTTGTCAAGAAGATGATAATTTGGAAGATAGTGATATTACAATCAAGGGTAGGAGAAGAGAAGATGAGGGCATCTTTTTGAGGCTTAGAATTGCAGACAAGGAAGGTCGTGTTCGAAACATCTACTTCCCATTCGACATAGAGACCGACACAGCAGCAAGTGTTGCTAATGAAATGGTTGCTGAACTGGACATGCCAGACCAAGATGTAACACAAATAGCAGACATGATTGATAGTGAAATTGCCAGTTTAGTCCCTGAATGGAAAAGGGGAACAGGAAAGGTGGAAATCTCAAATTGTGCAAACACTGGCTTCTGTCAGGATTGTGCTTCAGATAGTAACTTCCCAGATTATGTATCCTCAAATGGTCCTTGTGCTAAGAACCTACAAGTTCTTAATTGTTCTAAAAGTGGATATGCAGCTGCTCATAGCCGTTTTGAAGAAATTACATATAAAGTAGACGGGTCTGAGGAACAAGGTGGCCCTCTAGTTTCAGCAAGCCAAGGCTTCCAATATACTGACATCTGGGCACAGCGCGACAAGCCTGACATTACTTCTGAAGGGTCCAGAGATATCCATTATGATGAAGCACTTGAATCTTCAAAAGAGCCAAATTTGACAAGGGGTGATGGAACTACTAATGCTGATGATGAAAGAGGTGAGAACGCAAGGAAGTGTTCCTCTGATCATGCAGACTACACTCTCTTGGATGATTGCGAGAACGAAATAAGACAAGAGCTAAGGTGGCTTAAAGCAAAGTATCAGTTGCAGTTGAGGGAGCTCAAAAATCAGCAGTTACGAGTTCAATCAAAAGTGCCAAGCACACCTCCAAAAGATAAGAGCTTTCAGTTAGAACACACTAATGATAGTAGCAGTTCAAGGTTGTCAAAGTCGATAAAGTTGAAACTACAGAAAAAGAAACCACTTCTTGGACCTTCTAATACCAGGATGCAAATAGCTTCATGTTCCACTGATTGGGAGAATATCAAAAGGCAAATGGATCAAGATGCTGAAAACACAAGCGATTATATTTGGTCTGACCACTACACTGCCTCAAATGATTTATATAGAGAAGCTTTACTTCCTCAAACACTTCAGAGGGCAACTTCTCTTCCAGTTGATGCTGTAGATGTTTAA	2148	0.4111	MDVGANDEAEYSDFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHENIMKFYTSWVDTTNRNINFVTEMFTSGTLRQYRLKHRNVNVRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFINGNQGQVKIGDLGLAAILRQSHAVRCVGTPEFMAPEVYAEEYNELVDIYSFGMCILEMVTYEYPYSECNHPAQIYKKVISGKKPEALYKVKDPEVRQFVEKCLATVSLRLSARELLQDPFLQINDYGFIMNTLQYELDCSYSGQPGNGIHESSDCGGYCAIEPESEFDYHKIDDDLFGCQEDDNLEDSDITIKGRRREDEGIFLRLRIADKEGRVRNIYFPFDIETDTAASVANEMVAELDMPDQDVTQIADMIDSEIASLVPEWKRGTGKVEISNCANTGFCQDCASDSNFPDYVSSNGPCAKNLQVLNCSKSGYAAAHSRFEEITYKVDGSEEQGGPLVSASQGFQYTDIWAQRDKPDITSEGSRDIHYDEALESSKEPNLTRGDGTTNADDERGENARKCSSDHADYTLLDDCENEIRQELRWLKAKYQLQLRELKNQQLRVQSKVPSTPPKDKSFQLEHTNDSSSSRLSKSIKLKLQKKKPLLGPSNTRMQIASCSTDWENIKRQMDQDAENTSDYIWSDHYTASNDLYREALLPQTLQRATSLPVDAVDV*	716

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte2g02025	715	Coils	Coil	581	608	-	-
	Pte2g02025	715	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	11	640	-	-
	Pte2g02025	715	MobiDBLite	consensus disorder prediction	532	564	-	-
	Pte2g02025	715	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	148	160	IPR008271	GO:0004672\|GO:0006468
	Pte2g02025	715	Gene3D	Transferase(Phosphotransferase) domain 1	107	286	-	-
	Pte2g02025	715	SUPERFAMILY	Protein kinase-like (PK-like)	27	282	IPR011009	-
	Pte2g02025	715	Pfam	Protein kinase domain	27	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte2g02025	715	FunFam	probable serine/threonine-protein kinase WNK9	107	286	-	-
	Pte2g02025	715	Gene3D	Phosphorylase Kinase; domain 1	8	105	-	-
	Pte2g02025	715	Pfam	Oxidative-stress-responsive kinase 1 C-terminal domain	363	418	IPR024678	GO:0004674\|GO:0005524
	Pte2g02025	715	CDD	STKc_WNK	22	281	-	-
	Pte2g02025	715	ProSiteProfiles	Protein kinase domain profile.	24	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte2g02025	715	MobiDBLite	consensus disorder prediction	549	564	-	-
	Pte2g02025	715	SMART	serkin_6	24	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte2g02025	715	MobiDBLite	consensus disorder prediction	603	633	-	-
	Pte2g02025	715	Gene3D	-	345	428	-	-
	Pte2g02025	715	FunFam	Probable serine/threonine-protein kinase WNK1	8	105	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g02025	Pte-Chr2	40404081	40407080	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte2g02025	12	621	MAP Kinase Kinase Kinase	AT3G22420	52.147	0.0	617

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Pte2g02025		Pkinase	1.7e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g02025	K08867		-	gmx:100804179	914.45