Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02007 ATGAAAGGCTTGTTGAAAAAGCAAACTTCTCCTGATGTAGAAAATTATGCATCAAGTGAAGAACATTCCAGAGATGTTGCCTCCAGCTCAACATCTGAGAGCATTCCACAAGTTGCGGATAGCAAGTCCTTTTTCCATTCTCTATTTCATAAAATTGAACTGAACTTCGCTCGCATGATAATAGCAGAGATGATGGGCACTTTTGTTTTGATGTTCTCTATATGTGGAATCATTGGATGTACACAGCTAACAAGAGGTGAAGTGGGTCTCCTAGAGTACGCAGCTACAGCAGGACTATCAATCATTGTCATAATTTTCTCAATTGGTCAAATCTCCTGTGCGCATGTTAATCCAGCTGTGACAATAGCTTTTGCGGCATTTGGTGAATTTCCTTGGTCGAAGGTTCCATTCTACCTTATAGCACAACTGATTGGTTCTTTGCTGGCAACATGGATTGGAGGTTTTACCTACAGCATAAAGTCAGAGCTCTTGATCACAAGGCCTCTTCAGGGCTGGACTGCTGCGTTTACTGTGGAGTTCATTGCAACCTTCATTGTCATGTTCCTAGCCTCAGCATTGACACGCCAAGCGACATCAGTTGGCCATCTGTCTGGTTTTGTTGTTGGCATAGCCATTGCATTAGCTGTACTGATCACGGGGCCGGTTTCAGGTGGATCGATGAACCCTGCAAGGTCGCTTGGCCCTGCTCTTCTTTCATGGAAATTGAAGGACGTTTGGGTGTATCTCATTGCCCCTACTGCTGGAGGAGTAGCTGGTGCTCTGTCATTTCGTGTTCTTTGCCTGCAGCACCAACATTGCAATCCAATTTCCTCTCCCATACCCAGTGGCAGTGGAAGTCGTCGCTCCACATCCTCCTGTACTCTAATATGA 891 0.4523 MKGLLKKQTSPDVENYASSEEHSRDVASSSTSESIPQVADSKSFFHSLFHKIELNFARMIIAEMMGTFVLMFSICGIIGCTQLTRGEVGLLEYAATAGLSIIVIIFSIGQISCAHVNPAVTIAFAAFGEFPWSKVPFYLIAQLIGSLLATWIGGFTYSIKSELLITRPLQGWTAAFTVEFIATFIVMFLASALTRQATSVGHLSGFVVGIAIALAVLITGPVSGGSMNPARSLGPALLSWKLKDVWVYLIAPTAGGVAGALSFRVLCLQHQHCNPISSPIPSGSGSRRSTSSCTLI* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02007 296 SUPERFAMILY Aquaporin-like 54 274 IPR023271 -
Pte2g02007 296 Gene3D Glycerol uptake facilitator protein. 13 277 IPR023271 -
Pte2g02007 296 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Pte2g02007 296 PANTHER AQUAPORIN NIP2-1 28 271 IPR034294 -
Pte2g02007 296 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte2g02007 296 PRINTS Major intrinsic protein family signature 178 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte2g02007 296 PRINTS Major intrinsic protein family signature 58 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte2g02007 296 PRINTS Major intrinsic protein family signature 246 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte2g02007 296 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte2g02007 296 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte2g02007 296 MobiDBLite consensus disorder prediction 1 34 - -
Pte2g02007 296 Pfam Major intrinsic protein 54 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte2g02007 296 MobiDBLite consensus disorder prediction 11 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02007 Pte-Chr2 40284719 40286454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02007 58 266 Major Intrinsic Protein MIP AT5G37820 40.476 4.19e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02007 K09874 - qsa:O6P43_021616 365.54