Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte2g02003 | ATGGGAATTTCATGGAGTGGTGGTCGACATAGTAACAACTCCGACCAAAACCATCCGACACCGACGCCCATAGCACAACCTCCTTACTCCTCCTCTGCTACAGAAGGTCATTCTTTTCGTCCTCCACCTCCACCTCCAGCTACTGGAACTCCGTCACCCATAGCACAATCCCCTGAATCCTTCACGTGGATCACTCATCGACCTTTCCTGACAAGTAATATTAATTATGGTCACAGTACTACCTATCCTCCTCCATCACCACCACCTCCTCAAACCCAGTATTCCTCCGTTACCACCTATGCTAATTCTATGATCGGTCGCTCCCATTACCACCCTTATCATATCCATCATGCTAATGGGTGGCCTCCATTTCGTCCTCCTCCCCCACTTGCTCCTGCTCTCCCTGCACCATCTTATGTTGATCATCAAAATGCCAAGAAGGTTAAGAATGAGGTCAACGTCCATAAAGATACGGTCAAGCTCGAAGTTGACACGGTCAATCCTGATCATCAATTGGTTTCTTTCGTTTTCGATGCCTTATGTGACGGCAGTATCACAATCATGTACTTTGCCAAGGAAGAGACACAATGTGAATTTGTTCCTCTGTATCCTGAAGCTTTCAAACCAGTCAAAATCCCCTTTCAAAAGGGCCTTCATCAGAAGTTCATTCAAACTTCTGGATCAGGCATTGATTTGGGCTTCTTTGAGTTGGATGAACTCTCAAAACCAACATCTTCAGAAGACATCTTTCCTCTTGTAATTTGTGCTGAAACAAGCTTGATGTCAAAGTCTGCAGATGAGAGGTTGTGCCAGCCGATGTCAGATGCATCTACTAATCAGCAGATTACTCAAGCCATTATTGAGAAGAAAAACAGTGCTGATCGTTTTGGAGTCAAAGTGATAAAGCAGATTCTATGGATTGATGGGGTTCGTTATGAATTACGGGAGTTATATGGAATAGGAAATTCTGCAACAGAAGATTTTAGTGACAATGATCTGGGAAAGGAGTGTGCAATTTGTATGACGGAACCTAAGGACACAGCTGTCTTACCTTGCAGACATTTGTGTATGTGCAGTGATTGTGCAAAAGCGTTAAGACTTCAATCAAATAATTGTCCCATTTGTCGTCAACCAATTGAAGAATTGATAGAGATCAAGATAACCAGTAGTGATCGTTGA | 1179 | 0.4343 | MGISWSGGRHSNNSDQNHPTPTPIAQPPYSSSATEGHSFRPPPPPPATGTPSPIAQSPESFTWITHRPFLTSNINYGHSTTYPPPSPPPPQTQYSSVTTYANSMIGRSHYHPYHIHHANGWPPFRPPPPLAPALPAPSYVDHQNAKKVKNEVNVHKDTVKLEVDTVNPDHQLVSFVFDALCDGSITIMYFAKEETQCEFVPLYPEAFKPVKIPFQKGLHQKFIQTSGSGIDLGFFELDELSKPTSSEDIFPLVICAETSLMSKSADERLCQPMSDASTNQQITQAIIEKKNSADRFGVKVIKQILWIDGVRYELRELYGIGNSATEDFSDNDLGKECAICMTEPKDTAVLPCRHLCMCSDCAKALRLQSNNCPICRQPIEELIEIKITSSDR* | 393 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte2g02003 | 392 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Pte2g02003 | 392 | ProSiteProfiles | Zinc finger RING-type profile. | 337 | 376 | IPR001841 | - | |
Pte2g02003 | 392 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Pte2g02003 | 392 | PANTHER | MAHOGUNIN | 95 | 386 | IPR045194 | GO:0061630 | |
Pte2g02003 | 392 | MobiDBLite | consensus disorder prediction | 75 | 95 | - | - | |
Pte2g02003 | 392 | SUPERFAMILY | RING/U-box | 336 | 382 | - | - | |
Pte2g02003 | 392 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 321 | 386 | IPR013083 | - | |
Pte2g02003 | 392 | SMART | ring_2 | 337 | 375 | IPR001841 | - | |
Pte2g02003 | 392 | CDD | mRING-HC-C3HC5_MGRN1-like | 335 | 376 | IPR045195 | - | |
Pte2g02003 | 392 | Pfam | Zinc finger, C3HC4 type (RING finger) | 335 | 381 | - | - | |
Pte2g02003 | 392 | MobiDBLite | consensus disorder prediction | 38 | 52 | - | - | |
Pte2g02003 | 392 | FunFam | probable E3 ubiquitin-protein ligase LOG2 | 321 | 386 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte2g02003 | Pte-Chr2 | 40251816 | 40255220 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte2g02003 | 106 | 392 | C3H Transcription Factor Family | AT3G06140 | 56.566 | 4.61e-108 | 320 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte2g02003 | - | - | qsa:O6P43_021626 | 459.529 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte2g02003 | 2 | 40251816 | 40255220 | Pte2g02003 | 2 | 40251816 | 40255220 | RCT |