Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01989 ATGGGTTGTCTTCATTCCTTGTGCTGCAGACGGTATAGGCCATCAAAAGGAGGCTCCAAAGCAAGCAGGGACGAAGCAGACACTCTTAGTGTTCCTAGAAACCATGTTTTATCTCAGACACCATTGGCGATTGTTTCTGTTCCACCCCATAATTTCCATTTGGAGTATTCAGTTCTCACTCTGCCTGGATACTACCCTCAACCTACAGAAGAAGAAGAAAAAGAAATATCAGAACAACACAAAGGCAGTCCCTCAGTTAGAGAAAACCAAGATAGCTTCTGCATTAAAACAAAACTACAAGACAACCCAAGTATCCATTTTTTTGGAGTATATGATGGACATGGAGAATTGGGTAGTGAGTGTTCCAATTATGCCAAGGAAAAATTGGTAGAAGTTTTGTCAAATGACTCCACGCTATTACAGGACCCTGCCAGGGCTTATAATTTGGCATTTTTGACAACAAACTATGAACTTCGCAACAATGAGATTGATGATTCAGGAAGTGGCACTACAGCAATTACAGTACTTGTTATTGGAGATACACTTTTTGTTGCTAATGCCGGTGATTCTAGAGCAGTTCTAGCTGTTAAGGAAGGGAAACAAATTGTTGCTAAGGACTTGTCTTATGATCAGACTCCATTTCGGAAAGATGAGTGCTTAAGAGTCAAACTATGTGGAGCGAGGGTGTTGAATTTTAGTCAGGTGGAAGGACTTCAGGATACTAACATTGAAACATGGGGTGTAGAGGGTGATGGGGGTGATCCTCCAAGACTATGGCTGCCAGATAGGAATTATCCAGGGACAGCATTTACAAGGAGTATAGGAGACAGTGTAGCAGAGAGTATTGGTGTGATTGCTTTGCCAGAAGTCTCAACGGTTCAGCTTACACCTGATCATCTTTTCTTTGTTGTAGCCAGTGATGGAGTATTTGAATTCCTCTCAAGCCAAACCGTTGTTGATATGGCAGCAAGCTTTTCAGATCCTCGAGAAGCATGTGTTGCCATTGCTGAAGAGTCATATAAGCAATGGCTGGAACATGATATCAGGACAGATGATATAACAATCATCATTGTTAACATCAAAGGCTTATCCAATTCAGGTGTGTCTAAACATAAATCAGGAAAGATCCATGTGGGGACTACGCCATTGGAAAAGAAAGGAGCGTTTGAGACATCTGCTGGAACAAGATCAGCTTTTCACTGTCACATGATACGAAATCTTTTAGATTGTCATCTGTCCTGTAGACACGCGGTTTCAAAGAATCAAAGCCAGCCATAG 1278 0.4171 MGCLHSLCCRRYRPSKGGSKASRDEADTLSVPRNHVLSQTPLAIVSVPPHNFHLEYSVLTLPGYYPQPTEEEEKEISEQHKGSPSVRENQDSFCIKTKLQDNPSIHFFGVYDGHGELGSECSNYAKEKLVEVLSNDSTLLQDPARAYNLAFLTTNYELRNNEIDDSGSGTTAITVLVIGDTLFVANAGDSRAVLAVKEGKQIVAKDLSYDQTPFRKDECLRVKLCGARVLNFSQVEGLQDTNIETWGVEGDGGDPPRLWLPDRNYPGTAFTRSIGDSVAESIGVIALPEVSTVQLTPDHLFFVVASDGVFEFLSSQTVVDMAASFSDPREACVAIAEESYKQWLEHDIRTDDITIIIVNIKGLSNSGVSKHKSGKIHVGTTPLEKKGAFETSAGTRSAFHCHMIRNLLDCHLSCRHAVSKNQSQP* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01989 425 ProSitePatterns PPM-type phosphatase domain signature. 107 115 IPR000222 GO:0043169
Pte2g01989 425 SMART PP2C_4 69 358 IPR001932 -
Pte2g01989 425 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 362 - -
Pte2g01989 425 Pfam Protein phosphatase 2C 90 342 IPR001932 -
Pte2g01989 425 SUPERFAMILY PP2C-like 87 362 IPR036457 -
Pte2g01989 425 PANTHER PROTEIN PHOSPHATASE 81 359 IPR015655 GO:0004722|GO:0006470
Pte2g01989 425 MobiDBLite consensus disorder prediction 68 85 - -
Pte2g01989 425 CDD PP2Cc 88 343 IPR001932 -
Pte2g01989 425 Gene3D - 71 362 IPR036457 -
Pte2g01989 425 ProSiteProfiles PPM-type phosphatase domain profile. 73 360 IPR001932 -
Pte2g01989 425 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01989 Pte-Chr2 40157250 40160705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01989 1 365 PP2C-type Phosphatase Gene Family AT3G06270 61.202 1.84e-154 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01989 - - qsa:O6P43_003477 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01989 2 40157250 40160705 Pte2g01989 2 40157250 40160705 RCT