Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01984 ATGGCATCCTTGCTCGCTAGTAGTAGTGGCAGTCAAGTGTCTTCTATCCAGGAAAAAGGTAGTAGGAATAAGAGGAAATTCCGGGCCGATCCTCCTTCTGTAGAACCAAATAAAGTTGCTCCTTCAACTCAAACTGAATGCCTCAATTATGAATTTAGTGCTGATAAGTTTGAAACAGCAATGGGTTACGGGCAAGCCATTGCTTGTGAGCTCTGCAGTGTAAACCAAGACCATGCTGACGGATTGAAGCTTGACCTTGGATTGGCTAGTGCTCTAGGTCCTTCCGAGGTTGGACCCAGCCATAAGGATGAATTGGAGTCTGATGATTTCCATGATGCTGATTGGAGTGATATTACAGAAACCCATTTGGAAAAACTTGTTCTAAGCAATTTGGACGCCATTTTCAGGACTGCAATTGAAAAAATTGTTGCCTATGGTTACACCGAAGAGGTTGCAACCAAGGCTGTCTTGAGGAATGGTGTCTGTTATGGCTGTAAAGATACTGTCTCTAACATTGTCGACAATACTCTGGCATTTCTTAGAAATGGACAAGAGATTGATCCATCAAGGGAACACTATTTTGAGAATTTGCAACAGCTGGAGAAGTATATACTGGCTGAATTGGTCTGTGTTCTTCGAGAAGTCCGACCATTCTTTAGTACTGGTGATGCAATGTGGTGTTTGTTGATTTGTGATATGAATCTGTCCCATGCTTGTGCAATGGATAGTGATCCCTTGAGCAGTTTTACTACCAATGACACTCCAAGTGAGTGTTCCTCAGTTCCATCCCAACCTCAAATAAAAACAATAAAAGGACCTGAACTGACTCTCCCAAATCCCTGTAAATCCATCCCTTTAAGCTCTTCGGCTCATCAATGTCAGTCCGAGGCAATCGCCATGTCTGCAGTTCCCAACTTTACTGGTTCAAAGGATTGGGAGAAAGAGGGAAGCACAACATCTGTGCCTTCTGATAACTCTTCTAGTACCACCGCAGGTGTATCTGCATCCTCTGCACTAGAAGAAAAAATTGTGGTTAATAGGAAAGTTCATTCTGGTAACACGAGGAAGGATAATGTTCTCCGCCAGAAGTCATTTCATCTGGAGAAAAGTTACCGAACATATGGAAGCAAAGGGTCTTCACGGTGCACAAAACTCAGTGGTTTGAGTGGTTTAATTTTGGATAAGAAACTCAAATCTGCTGACTCTGCAGTTAATATGAAGAACGCTTCCCTAAAAATAAGTAAAGCAATGGGTATTGACATGAACCATGATCACAATAACCTTAATTTTGCATCCAATGCAGGACCTTCTACACCTGTATCCTTTGACCTGGATACTGTTGGTACTGGTCCTAACTCTCCCAAGTCCAGCCTTGCTTCTTCATTTTCTGCAGTCAATGCTTCACATGCACTGCCTGCACTCAGTAGTCCTCCCACATTGTCAACAGCAGATACTGAACTTTCTCTTTCCTTATTGTCTAAAAGCAATTCTTCGTTGCACATTAATTGTAATCCTGAGATATGTAACAGTACTTGTGACGGGAAACCATATGACAAATCCCAGGGTCAATGGATACCGCGGGATAAAAAAGATGCGATGATTTTAAAGTTAGTCCCAAGGGTTTGGGAGCTTCAAAATCAGCTTCAAGAATGGACTGAATGGGCCAATCAGAAGGTTATGCAGGCAGCTCGTAGGCTAAGTAAGGACAAAGGTGAACTTAAGACACTGAGGCAAGAGAAAGAGGAAGTTGAGCGTCTGAAGAAAGAGAAGAAGATGCTCGAGGAAAACACCATGAAAAAGCTCTCTGAGATGGAGCTTGCCTTGTGTAAAGCAAGTGGGCAGGTCGAACGAGCCAATGCCACTGTCTGCAGGCTTGATGTGGAGAATGCTGCATTGAGGCGGGAGATGGAGGCTGCTAAGTTGCATGCTGCTGAGTCTGAGGCAAATTGTCAAGAGATGTCGAAGAAAGAGGTATTCACCCAAATACAGTTTCAGTCATGGGAGAAGCAGCAATTCTATTTTCATGAAGAACTCTTGGCTGAAAAGCGTAAATTTGCCCAGCTGCTACAGGAATTGGATCAAGCTAAATTGCTGTACGACGTAATTGAGGCTAGATGGGAACAGGAAAAGAAGGCGAAGGATGAACTTCTTTTGCAGGCTAGTGCCATAAGAAAAGAAAAGGAGCAACTTGAGGCGTCAGCTAAATCTAAGGAAGATATTATCAAATCAAAAGCTGAAAAGAATCTGCAGAGATACAAAGAAGACATTCAGAAGCTTGAAAAGGAAATCTCTCAATTGCGACTGAAGACCGATTCTTCAAAAATAGCTGCACTTCGGAGGGGTATTGATGGAAACTTGGGAGGAAGATTTGTGGACAATAAAAGTGGATCGACTAAGAAGGGAAGCCATGCCTCTTTGATCTCGGAGGTAGTTGCTGGTTACCATGACTATTCTGGGACAGGAGGTGTCAAACGCGACCGCGAATGTGTGATGTGCCTCTCAGAAGAGATGTCAATTGTTTTTCTCCCATGTGCTCACCAGATAGTTTGTACTGTGTGCAATGAGCTCCATGAGAAACAGGGTATGAAAGACTGTCCTTCATGTAGGAGTCCAATCCAGCAGCGAATTCCTGTACGTTACACTCGTAGTCGTACTTAA 2658 0.4327 MASLLASSSGSQVSSIQEKGSRNKRKFRADPPSVEPNKVAPSTQTECLNYEFSADKFETAMGYGQAIACELCSVNQDHADGLKLDLGLASALGPSEVGPSHKDELESDDFHDADWSDITETHLEKLVLSNLDAIFRTAIEKIVAYGYTEEVATKAVLRNGVCYGCKDTVSNIVDNTLAFLRNGQEIDPSREHYFENLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDMNLSHACAMDSDPLSSFTTNDTPSECSSVPSQPQIKTIKGPELTLPNPCKSIPLSSSAHQCQSEAIAMSAVPNFTGSKDWEKEGSTTSVPSDNSSSTTAGVSASSALEEKIVVNRKVHSGNTRKDNVLRQKSFHLEKSYRTYGSKGSSRCTKLSGLSGLILDKKLKSADSAVNMKNASLKISKAMGIDMNHDHNNLNFASNAGPSTPVSFDLDTVGTGPNSPKSSLASSFSAVNASHALPALSSPPTLSTADTELSLSLLSKSNSSLHINCNPEICNSTCDGKPYDKSQGQWIPRDKKDAMILKLVPRVWELQNQLQEWTEWANQKVMQAARRLSKDKGELKTLRQEKEEVERLKKEKKMLEENTMKKLSEMELALCKASGQVERANATVCRLDVENAALRREMEAAKLHAAESEANCQEMSKKEVFTQIQFQSWEKQQFYFHEELLAEKRKFAQLLQELDQAKLLYDVIEARWEQEKKAKDELLLQASAIRKEKEQLEASAKSKEDIIKSKAEKNLQRYKEDIQKLEKEISQLRLKTDSSKIAALRRGIDGNLGGRFVDNKSGSTKKGSHASLISEVVAGYHDYSGTGGVKRDRECVMCLSEEMSIVFLPCAHQIVCTVCNELHEKQGMKDCPSCRSPIQQRIPVRYTRSRT* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01984 885 MobiDBLite consensus disorder prediction 1 42 - -
Pte2g01984 885 Coils Coil 559 603 - -
Pte2g01984 885 MobiDBLite consensus disorder prediction 309 336 - -
Pte2g01984 885 MobiDBLite consensus disorder prediction 255 270 - -
Pte2g01984 885 SUPERFAMILY RING/U-box 825 876 - -
Pte2g01984 885 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 820 879 IPR013083 -
Pte2g01984 885 PANTHER OS05G0141500 PROTEIN 13 878 IPR046934 -
Pte2g01984 885 MobiDBLite consensus disorder prediction 311 336 - -
Pte2g01984 885 Coils Coil 713 776 - -
Pte2g01984 885 Coils Coil 629 656 - -
Pte2g01984 885 ProSiteProfiles Zinc finger RING-type profile. 829 869 IPR001841 -
Pte2g01984 885 Pfam Zinc finger, C3HC4 type (RING finger) 826 874 - -
Pte2g01984 885 MobiDBLite consensus disorder prediction 1 18 - -
Pte2g01984 885 Coils Coil 675 705 - -
Pte2g01984 885 Pfam Family of unknown function (DUF6592) 130 241 IPR046527 -
Pte2g01984 885 MobiDBLite consensus disorder prediction 255 274 - -
Pte2g01984 885 CDD RING-HC_MIP1-like 824 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01984 Pte-Chr2 40109631 40114030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01984 829 878 C3H Transcription Factor Family AT1G73950 40.000 4.87e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01984 - - pvy:116145486 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01984 2 40109631 40114030 Pte2g01984 2 40109631 40114030 RCT