Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01980 ATGATAACAAGATGTGATTTTGTCATTTCAGACTTGGAATCATTAGACATTGAGGATGCAGTCATAGATGAGCCTTCTGCTAGTCTTGCACAAGAACGTACCTCTGCAACATTGCAATCCGAAACAGCTTCTTCAAATGTCAGCGCTTCTGCCTCTGAAGATGAGTCATCAGAGCCAAGTGCAGCTGCCGCCCATTGGCGAGGTTTCTTCCACTTACTGAAGAAAGGGCCACAAGAACGTTTGAAAGGCTTACATCCCCGATTAAGTGTTCCAAGACTCACAAGAAGAAAAAGTAAAAGAATTAGGGAGGAAATGGTTCCAGACCACTCTCCATCTCTGAAATCTTCCTTTGATGGTGAATTTTGCTGCTTCAAATCTTCTTGGAAGAATTTCAGCCTCGCCGATCTCCATGCTGCAACGAATAACTTCAGTCAAGGGAATTTGATTGGACAAGGAGGCTATGCTGAGGTGTACAAGGGTGAGCTCAAAGATGGACAACATGTTGCAATTAAACGATTGACAAGAGGAAGCCAAGAAGAAATGATTTCTGATTTCTTATCTGAGCTTGGTGTTATAGTCCATGTAGATCACCCCAATATTGCAAAGTTGATTGGATATGGTGTGGAAGGAGGAATGCATCTTGTCCTTCAACTGTCTCCACATGGCAGCCTATCTTCTATACTCTATGGGCCTAGAGAGAGATTAGATTGGAAACTCAGATATAAGATTGCTATTGGAACTGCAAAAGGTCTTCAGTATCTTCATGAAGAGTGTCAGAGAAGAATTATACACAGAGATATCAAGGCTGCTAATATTTTGCTTTCACAAGATTTTGAGCCTCAGATATCTGATTTTGGACTTTCTAAGTGGTTACCTGATCAATGGACTCACCATGTTGTGTCAAATTTAGAAGGCACATTTGGCTACCTTCCTCCTGAACTCTTCATGCATGGTATCGTAGATGAAAAAACAGATGTCTATGCTTATGGGGTGTTATTATTGGAGCTTCTTACAGGAAAACCAGCTTTAGATAGCTCTCAGAGAAGTCTTGTAATGTGGGCAAAGCCATTGCTTGATAAGAATAGCATGAAGGAGCTTATCGATCCGTGTCTTTCTAATGCCTATGATGAATCAGAGCTGGACCGAATTGTCTTGATAGCTTCAATGTGCATAAGTCCGACTTCAGCTCAACGACCTCCAATGAGCGAGGTTGTACAAATCCTAAAAGCTGAAGGACCTCATTTGGATTTGATAAGAAACCAGCAGAAGTGTAAGCTTCAAAGAACATACTCAGAGGAACTATTAGATGCAGATGACTACAACTCCACTAAATTTCTCAACGAGTTGCATCAACAGACGGATTCTGTTCTGAGCCACTGCAATTCTATTAAACCTGTGAAAGGTGACAAAGCAGAAACAGGTGGTTCCTCCACCCACATGGAAATTAGAAACTAG 1455 0.4151 MITRCDFVISDLESLDIEDAVIDEPSASLAQERTSATLQSETASSNVSASASEDESSEPSAAAAHWRGFFHLLKKGPQERLKGLHPRLSVPRLTRRKSKRIREEMVPDHSPSLKSSFDGEFCCFKSSWKNFSLADLHAATNNFSQGNLIGQGGYAEVYKGELKDGQHVAIKRLTRGSQEEMISDFLSELGVIVHVDHPNIAKLIGYGVEGGMHLVLQLSPHGSLSSILYGPRERLDWKLRYKIAIGTAKGLQYLHEECQRRIIHRDIKAANILLSQDFEPQISDFGLSKWLPDQWTHHVVSNLEGTFGYLPPELFMHGIVDEKTDVYAYGVLLLELLTGKPALDSSQRSLVMWAKPLLDKNSMKELIDPCLSNAYDESELDRIVLIASMCISPTSAQRPPMSEVVQILKAEGPHLDLIRNQQKCKLQRTYSEELLDADDYNSTKFLNELHQQTDSVLSHCNSIKPVKGDKAETGGSSTHMEIRN* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01980 484 MobiDBLite consensus disorder prediction 32 57 - -
Pte2g01980 484 Gene3D Phosphorylase Kinase; domain 1 108 217 - -
Pte2g01980 484 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 113 217 - -
Pte2g01980 484 MobiDBLite consensus disorder prediction 32 58 - -
Pte2g01980 484 SUPERFAMILY Protein kinase-like (PK-like) 128 437 IPR011009 -
Pte2g01980 484 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 220 422 - -
Pte2g01980 484 ProSiteProfiles Protein kinase domain profile. 143 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01980 484 PANTHER OS08G0249100 PROTEIN 30 442 IPR046958 -
Pte2g01980 484 CDD STKc_IRAK 149 409 - -
Pte2g01980 484 Pfam Protein tyrosine and serine/threonine kinase 145 408 IPR001245 GO:0004672|GO:0006468
Pte2g01980 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Pte2g01980 484 SMART serkin_6 143 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01980 484 Gene3D Transferase(Phosphotransferase) domain 1 220 429 - -
Pte2g01980 484 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01980 Pte-Chr2 40091579 40093886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01980 98 409 Receptor kinase-like Gene Family AT4G02010 42.121 8.18e-74 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte2g01980 PK_Tyr_Ser-Thr 8.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01980 - - qsa:O6P43_003486 632.869