Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01976 ATGGAAGCACCGCCTCCTTCCCCGTCACGTTCATCGATTATCACCGATCGATTCAGGGCGTCAGACATGGCGGACCAACCGGAAGATATTACGTCGTCTTCGTTTTGGGACTTGGATTTCCTGTTAGACTTCACCTTAGACGATCAACTGCCTGTCGCGTCGTTTGACGATTGCGGTCAGAGCTCTCAAGTTTCTCAATCGCCCGAGCTGAATCCTCAACTTCAACAACCACCGCAGCTACTAGAGAGTACTACTGCTGCTACTGCTGTTTCAACTAGTACTAAGAGTACGAATAAGGCTGATCGGATTAGGAAACGCGACCCGAGACTGTCTTGTTCCAACTTCATTGCAGGTCGGATCCCCTGTGCTTGTCCAGAGATCGATGAGAAGCTTGCGGAGTTGGAGGAGTCCAGTTTGCCTGGGAAGAAACGCGTTCGAACGTCCCGTAGGTCCTCTGGGGGTGCTCGGTGTCAAGTACCGGGATGTGGGGCTGATATCAGTGAGCTTAAAGGGTATCACAAGCGGCATAGGGTTTGTTTGCAATGCGCCATTGCAACCACTGTTGTACTTGATGGAGAAGAAAAGAGATACTGCCAACAGTGTGGCAAGTTTCATATATTGTCGGATTTTGATGAGGGTAAACGTAGCTGTAGAAGAAAACTAGAACGCCATAACAACAGGAGGCGAAGAAAGCCTTTGGATTTTAGGGCCGAAGAGGAGAAGGAAATATCAGGGGTTATGCAGAATGAGGATCACAACAATGATATTGAAGCAGGAAAAGATGATTTATACCTTAGCAGTCCAATAGCTGAAAAAATAGTTTCCTTTGAGAACGAAGATTGTCAAGTGACTACGATGTGCTCACCTCCCGGCAGTCAAAATGTTCATGGCGATAGTGTGGTATTATTTGCTGCTTCTGGTGAAAAACACAATAATGGTGGAAAAGACAATACCAACAATTATCTTTCACCATCGTACTGCAACAAGAGTGATTACTTGTCCGTGTGTCCTACAGGTCGCATATCTTTCAAGCTTTATGATTGGAATCCTGCAGAGTTTCCCAGAAGACTTCGGCATCAAATATTCCACTGGTTGGCTAGTATGCCCGTTGAGCTGGAGGGGTATATTCGTCCTGGATGCATAATCTTGACTTTATACATTGCAATGCCAAAGCTTATGTGGCAAAATTTACTTGAAGACCCTATATCATACTTGCACAAACTTGTAATTACTCGTGAAAGTATGCTTTCTGGAAGTGGCACTATGAGAGTATACCTCAATGACCAGATGTTTGGTGTTAACAGAGATGGAAGCTCTGTGACTAGAGTCAATGTAGCAGCGCAAGCACCAAAGCTTCATCATGTTCATCCTTTGCATTTTGAGGCTGGAAAACCTATGGAATTTGTTGCTTGTGGAACTAATTTGCTGCAGCCTAAATTTCGGCTTCTGGTATCATTTTCTGGGAAGTACCTGGAGCATGACTGTTCTGTTGCTTCTCCAAATGATCAGACTGTTGACGCATGCTGTATTCCTGGACACCAGCAATACAAGATAACGGTTCCTCATATAGAAGCAAACCTCTATGGTCCTGTGTTTGTTGAGGTGGAGAACGAGTCTGGTTTGTCGAACTTCATTCCCTTACTAATTGCCAGCAAAGAGATTTGTTCTGAAATGATGATGATTCAGCAGAGATTTAGTCAATCTCTCCTTTCTGAAGGATTTGTTTCCGCAACTTCCTTTTGTGAGCCATGTGAAGCCTCTGCACTTAGAAGAGCAACATATTTTGACTTACTTGTCGATGTAGCGTGGTTAGTTAAGAAGCCTACTGCAGAAGCTTTTGTTAGAACCATGACAGCCACCAAAATTCAAAGATTATGTTGTTTGCTGGACTTTTTAGAAAACCATGATTCTGCAGCTGTTTTGGCTGTAGTATTACAAAATCTGAGTTTTGTGACTGAAAACATGGACTATGATAATACGGATGAAGGCACTAATAATGTTGACATAAATTTGTTATCGAAACACATGAATTATGCTAGAGATTTTCTCTCTCGAAAAAGTAGAAAAGACATAACTTTAGGGCTTAACGCGTGGAACTTGAAGGCAGAAGGATGTAGAGCTTCTCAAAGCTTCTCCAAGAACATTCTATCCGCTGTTCAAGTCATCAATCAGGGAATTGGGGATAAGCCAAATGAAAAATTGCGTCTGCTGAAGCCTGAAACTGTGCCTCTTATAGATAGCAATAGGGAGATTATTATGAATGTGAACCTCGTAAAAGACTCACCAAGAAAATCGTATCGTCAATACTTTAGAAGAGGAGGCTTGAGCTCTCGCCCTACTGTCTTTTTAATTGCCTCGGTAGCTGTCTGTCTTGGTTTATGTGCAGCTCTTCTTCATCCTCACAAGGTTGATGAGTTTGCTGTCACCATACGAAGGTGTCTATTTGACTGA 2451 0.4321 MEAPPPSPSRSSIITDRFRASDMADQPEDITSSSFWDLDFLLDFTLDDQLPVASFDDCGQSSQVSQSPELNPQLQQPPQLLESTTAATAVSTSTKSTNKADRIRKRDPRLSCSNFIAGRIPCACPEIDEKLAELEESSLPGKKRVRTSRRSSGGARCQVPGCGADISELKGYHKRHRVCLQCAIATTVVLDGEEKRYCQQCGKFHILSDFDEGKRSCRRKLERHNNRRRRKPLDFRAEEEKEISGVMQNEDHNNDIEAGKDDLYLSSPIAEKIVSFENEDCQVTTMCSPPGSQNVHGDSVVLFAASGEKHNNGGKDNTNNYLSPSYCNKSDYLSVCPTGRISFKLYDWNPAEFPRRLRHQIFHWLASMPVELEGYIRPGCIILTLYIAMPKLMWQNLLEDPISYLHKLVITRESMLSGSGTMRVYLNDQMFGVNRDGSSVTRVNVAAQAPKLHHVHPLHFEAGKPMEFVACGTNLLQPKFRLLVSFSGKYLEHDCSVASPNDQTVDACCIPGHQQYKITVPHIEANLYGPVFVEVENESGLSNFIPLLIASKEICSEMMMIQQRFSQSLLSEGFVSATSFCEPCEASALRRATYFDLLVDVAWLVKKPTAEAFVRTMTATKIQRLCCLLDFLENHDSAAVLAVVLQNLSFVTENMDYDNTDEGTNNVDINLLSKHMNYARDFLSRKSRKDITLGLNAWNLKAEGCRASQSFSKNILSAVQVINQGIGDKPNEKLRLLKPETVPLIDSNREIIMNVNLVKDSPRKSYRQYFRRGGLSSRPTVFLIASVAVCLGLCAALLHPHKVDEFAVTIRRCLFD* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01976 816 MobiDBLite consensus disorder prediction 232 258 - -
Pte2g01976 816 Gene3D - 153 218 IPR036893 GO:0003677|GO:0005634
Pte2g01976 816 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 71 632 IPR044817 GO:0003677
Pte2g01976 816 Pfam SBP domain 157 231 IPR004333 GO:0003677
Pte2g01976 816 SUPERFAMILY SBT domain 155 235 IPR036893 GO:0003677|GO:0005634
Pte2g01976 816 MobiDBLite consensus disorder prediction 57 97 - -
Pte2g01976 816 MobiDBLite consensus disorder prediction 57 102 - -
Pte2g01976 816 ProSiteProfiles Zinc finger SBP-type profile. 154 231 IPR004333 GO:0003677
Pte2g01976 816 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01976 Pte-Chr2 40030990 40036690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01976 32 811 SBP-box Gene Family AT5G18830 46.750 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pte2g01976 SBP 1.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01976 - - qsa:O6P43_021678 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01976 2 40030990 40036690 Pte2g01976 2 40030990 40036690 RCT