Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01966 ATGGATTGCAACAAGGAAGAGGCCTTAAGGGCCAAGGATATTGCCCAAAAGAAGATGCAATTGAAAGATTTTGAAGGGGCTCGTAAATTAGCTCTCAAGGCTCAGAAATTGTATCCTGATTTGGAGAATGTGGCTCAGATGATTACAGTATGTGATGTGCATTGTTCTGCAGAGCAGAAATTATATGCTAATGAGACAGACTGGTACGGGATTCTGCAAGTTGAGCCAGCAGCAGTTGAGGCAACAATTAAAAAGCAATACAGAAAGTTTGCTCTCCAACTTCACCCTGATAAGAATAGGTTTCCTGGGGCAGAAGCGGCTTTTAAGTTGATTGGGGAAGCTCAAAGAGTACTTCTAGACCACCAAAAACGTGCTTTGCATGACATGAAACGCAGAGTTCCTGCAAGTAGACCTACAGTGCCTCCTCAGCCACCACAGAGGGTGAATAAAGTTGTCAACGTTGCGCCCGAAACAAATATGAGAGGCGATTATACTTACTTCAATCGTCAGCGCCAGCAAAGCCGTAATTCTCGGTCTGCAACAACACAACAGAGTTTCAATGGTGTTGGTCCTACTTTTTGGGACTGTCTGTATATACTGTTCAGTTAG 609 0.4384 MDCNKEEALRAKDIAQKKMQLKDFEGARKLALKAQKLYPDLENVAQMITVCDVHCSAEQKLYANETDWYGILQVEPAAVEATIKKQYRKFALQLHPDKNRFPGAEAAFKLIGEAQRVLLDHQKRALHDMKRRVPASRPTVPPQPPQRVNKVVNVAPETNMRGDYTYFNRQRQQSRNSRSATTQQSFNGVGPTFWDCLYILFS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01966 202 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pte2g01966 202 CDD DnaJ 67 120 IPR001623 -
Pte2g01966 202 Gene3D DnaJ domain 63 195 IPR036869 -
Pte2g01966 202 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pte2g01966 202 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pte2g01966 202 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pte2g01966 202 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Pte2g01966 202 PANTHER BNAC03G44070D PROTEIN 1 183 - -
Pte2g01966 202 Pfam DnaJ domain 67 128 IPR001623 -
Pte2g01966 202 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01966 Pte-Chr2 39972301 39972909 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01966 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 41.538 4.53e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01966 - - cill:122319425 242.276