Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01963 ATGGATTGCAACAAGGAAGAGGCCTTAAGGGCCAAGGATATTGCCCAAAAGAAGATGCAATTGAAAGATTTTGAAGGGGCTCGTAAATTAGCTCTCAAGGCTCAGAAATTGTATCCTGATTTGGAGAATGTGGCTCAGATGATTACAGTATGTGATGTGCATTGTTCTGCAGAGCAGAAATTATATGCTAATGAGACAGACTGGTACGGGATTCTGCAAGTTGAGCCAGCAGCAGTTGAGGCAACAATTAAAAAGCAATACAGAAAGTTTGCTCTCCAACTTCACCCTGATAAGAATAGGTTTCCTGGGGCAGAAGCGGCTTTTAAGTTGATTGGGGAAGCTCAAAGAGTACTTCTAGACCACCAAAAACGTGCTTTGCATGACATGAAACGCAGAGTTCCTGCAAGTAGACCTACAGTGCCTCCTCAGCCACCACAGAGGGTGAATAAAGTTGTCAACGTTGCGCCCGAAACAAATATGAGAGGCGATTATACTTACTTCAATCGTCAGCGCCAGCAAAGCCGTAATTCTCGGTCTGCAACAACACAACAGAGTTTCAATGGTGTTGGTCCTACTTTTTGGACTGTCTGTATATACTGTTCAGTTAGGTTTCAGTATTACAGGGCAATGCTAAATAAAACTGTTCTTTGTCAAAATTGCAACAAGACCTTCACGGCAAGTGAATTGAAGGAAGCTCCATCGCCAGCAGCTAACCAAAGTCAGGAAGCATTTGCTAAGAATGCTTTTAGTCAAGGCACGTTCAAAGCAGACTCTGTATGTAAGGCCAATGTGAGTGCTGAGAAGCCGGACATAGATACTCAGAGAGCAGGTTTCCAATCTAATGTTGGCTGTGAAAAACAAAATGGGAAAAGAAAGAGGAATACGAAATCAGAATCCAGTGAAAATTCTGACTCTGTTGACAGCTCGGAGTCAGAAGATGTTGAAGTTGACTGTGTTAATGTCATGGGTAGTTTTGTGAGCTCTGGAGAGAATCGACGGAGGTCTTCGCGAAAGAAGCAACAGGTTTCATATAAAGAAAATTTGAGTGACGATGATGACAGCCTATCAGTTCCATATAAAAGGGGTAAGGAGGGTGGATCTCAACGTGTTGGTATAGCTGTTGAGGAAGATCAGAAAGAGGCCAAACCAAAACAGCATTCTCATCTTCAAGAGAACTTATCACAGAAGGGTAATAGGTCTAATAAGGAGAGACAAAAGGTTGAAGTTGGAGAGGACAACTCAAAGGATAACTCCAAAGCTCACAATAGCTGCAAAAAAGATTCAACCTCTAAAGATGCTTCATTAACAGAAACTTATGAGTATCCTGATCCAGAGTTTAGTGACTTCAATGTCAAAGAGGAATCTTTTGCTGCTGGGCAGATTTGGGCGACTTATGATCCTATTGATGCCATGCCTAGATTCTACTGCCAGATCAAGAAAGTTGTTTCTTCTGAACTCGAGCTACAGATAAGGTGGCTTGAACCTGACCCGGATGAGGAGGATGAACAGAATTGGAGTCAGAATCATTTGCCCATATCTTGTGGTAAGTTTGGATTTGGGTATCATGATACTTATAGGGATGCTCAAGCGTTTTCTCATCTGGTATCATGGGAAAAAGGTACGCGCAAAAATTCTTACAAAATACATCCGAGAAAGGGAGAGACTTGGGCTCTTTTTAAAAATTGGGATATTATGTGGTACTTAGATGCAGCTGCGCATCAGTCATTTGAATATGAATTTGTTGAAATTTTGTCTGATTATGTAGAAGGTGAGGGTGTACGTGTTGCACAGTTGGGGAAGTTGAAAGGCTTTGTGAGTCTTTTTTGTCGAGTGTTGAAGAATGGTGTTGAAACTTACCAAGTTCCACGTGCAGAATTGTTTAGGTTCTCTCACAGGGTTCCTTCCTTTCAAATGACTGGTGATGAAAGAGAAGGGGTGCCAAAAGGATCTTATGAGCTTGATCCTGCATGCTTGCCGGATAAGGTTGAAGAGATTTCTCTTCCTGAAAGTTTGGGTGTTAAGTTTGGCATGACCCAACCTGCTAGTAAAATTCCACAATCTTCACCTAGGTTGAGGGGCACCAAGAAGTCTGATGGCAGTGCATCTACTGTGGATGACTTTGATGCAGAAGGGAGCAATCTAAAGCGCAAAAGTGATACAGATTCTATCCTTGTTGATGTTGAAGAGAGAACCTCAAAGTCCAATAGCAAGGATTTGACTCCGAAGAAAAGAGAGACCAGGAGTTCTATTCTGCATGATAAGTGTAGCAAGGGTTCCATCGTCAAGGAAAATCTTCTGGCCTCTTCCACATCTGCGAATGCTGATGATGCTACTGAAATTCCAGATCCTGAGTTCCACGATTTTGCTGCTCACAAGTCTGAAGATAAAATTCGAAGAGGCCAAATTTGGGCAGTCTATTGTACTGAGGATGGTATGCCAAAGAATTATATTCAAATCAAGAAAGTAGATTCTCATCCAGAATTTACATTGCATGTTACTTTGCTTTCTGGTTCTTTTTCACCAGATACTATTGTCTGGGACAATGCGAAGATGCTTGTGTCTTGTGGGACATTCAAAGTTCGAAAGGCCGAAGAGGATGGAAAATATACAAGCACTGCAAAATTTTCACATCAGGTTCAGGCTGTTCATAAAAGGAACGAATATTACATTTTTCCAAAGGAAGGAGAAATATGGGCTTTATACAAGAACTGGACACCTAAATTCACAATTTCTGACATGGAAAACGCTGAATATGACATAGTGGAAGTACTTGCCAAAACTGCTATAGAGATAGAAGTTTTAGTTCTGGAATTCGTGAAGAATACTGTTTCCGTTTTCAAAGGTCAAATGGAAAATGGAACAGCTATCACCAGGAAAATCCCACGTGCTGAGCTGTATAGGTTTTCCCATCAAATTCCTGCTTTCAAGTTGACCGAAGAGCACGATAACAGTATGATAGGCTTCTGGGAACTAGATACAGCAGCCTTGCCTGTTCACTTTTTTGAAAAATGA 3012 0.415 MDCNKEEALRAKDIAQKKMQLKDFEGARKLALKAQKLYPDLENVAQMITVCDVHCSAEQKLYANETDWYGILQVEPAAVEATIKKQYRKFALQLHPDKNRFPGAEAAFKLIGEAQRVLLDHQKRALHDMKRRVPASRPTVPPQPPQRVNKVVNVAPETNMRGDYTYFNRQRQQSRNSRSATTQQSFNGVGPTFWTVCIYCSVRFQYYRAMLNKTVLCQNCNKTFTASELKEAPSPAANQSQEAFAKNAFSQGTFKADSVCKANVSAEKPDIDTQRAGFQSNVGCEKQNGKRKRNTKSESSENSDSVDSSESEDVEVDCVNVMGSFVSSGENRRRSSRKKQQVSYKENLSDDDDSLSVPYKRGKEGGSQRVGIAVEEDQKEAKPKQHSHLQENLSQKGNRSNKERQKVEVGEDNSKDNSKAHNSCKKDSTSKDASLTETYEYPDPEFSDFNVKEESFAAGQIWATYDPIDAMPRFYCQIKKVVSSELELQIRWLEPDPDEEDEQNWSQNHLPISCGKFGFGYHDTYRDAQAFSHLVSWEKGTRKNSYKIHPRKGETWALFKNWDIMWYLDAAAHQSFEYEFVEILSDYVEGEGVRVAQLGKLKGFVSLFCRVLKNGVETYQVPRAELFRFSHRVPSFQMTGDEREGVPKGSYELDPACLPDKVEEISLPESLGVKFGMTQPASKIPQSSPRLRGTKKSDGSASTVDDFDAEGSNLKRKSDTDSILVDVEERTSKSNSKDLTPKKRETRSSILHDKCSKGSIVKENLLASSTSANADDATEIPDPEFHDFAAHKSEDKIRRGQIWAVYCTEDGMPKNYIQIKKVDSHPEFTLHVTLLSGSFSPDTIVWDNAKMLVSCGTFKVRKAEEDGKYTSTAKFSHQVQAVHKRNEYYIFPKEGEIWALYKNWTPKFTISDMENAEYDIVEVLAKTAIEIEVLVLEFVKNTVSVFKGQMENGTAITRKIPRAELYRFSHQIPAFKLTEEHDNSMIGFWELDTAALPVHFFEK* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01963 1003 MobiDBLite consensus disorder prediction 676 751 - -
Pte2g01963 1003 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pte2g01963 1003 MobiDBLite consensus disorder prediction 699 751 - -
Pte2g01963 1003 Gene3D DnaJ domain 63 192 IPR036869 -
Pte2g01963 1003 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 668 - -
Pte2g01963 1003 Pfam DnaJ domain 67 128 IPR001623 -
Pte2g01963 1003 MobiDBLite consensus disorder prediction 680 698 - -
Pte2g01963 1003 MobiDBLite consensus disorder prediction 286 300 - -
Pte2g01963 1003 MobiDBLite consensus disorder prediction 327 444 - -
Pte2g01963 1003 MobiDBLite consensus disorder prediction 331 359 - -
Pte2g01963 1003 CDD DnaJ 67 120 IPR001623 -
Pte2g01963 1003 MobiDBLite consensus disorder prediction 373 389 - -
Pte2g01963 1003 MobiDBLite consensus disorder prediction 271 314 - -
Pte2g01963 1003 MobiDBLite consensus disorder prediction 397 433 - -
Pte2g01963 1003 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pte2g01963 1003 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pte2g01963 1003 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pte2g01963 1003 Pfam Domain of unknown function (DUF3444) 437 642 IPR024593 -
Pte2g01963 1003 Pfam Domain of unknown function (DUF3444) 777 980 IPR024593 -
Pte2g01963 1003 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Pte2g01963 1003 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01963 Pte-Chr2 39936180 39939666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01963 4 233 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.191 1.64e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01963 - - qsa:O6P43_003497 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01963 2 39936180 39939666 Pte2g01963 2 39936180 39939666 RCT