Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01960 ATGAATCAGTATCATATATACGAAGCTATTGGCCGAGGCAAATACTCGACTGTCTATAAAGGTAGGAAGAAGAAGACCATTGAGTATTTTGCCATTAAAAGCATCGATAAGTCGCATAAAAGCAAAGTTCTTCAAGAAGTGAAGATTCTTCACGCTTTAGATCACCCAAATGTACTTAAATTCTATTCGTGGTACGAAACCTCTGCTCACCTGTGGTTGGTTTTGGAATATTGTGTTGGCGGAAATCTTATGTCTTTATTGCAGCAGGATGGTCAACTTCCTGAAGATTCTATCCACGACTTTGCTCATGATCTTGTCAATGCTTTGCAGTTTTTACATTCAAATGGAACTATTTACTGTGATTTGAAACCATCAAATATCCTGCTGGATGAAAATGGACACATAAAGCTGTGTGATTTTGGATTAGCTCGAAAGTTGAGGGACATATCGAATGTACCATCTTCCTCGCTGCCGCAAGCAAAACGTGGGACACCCTGCTACATGGCTCCTGAGCTATTTGAAGATGGAGTCGTTCATTCATATGCTTCGGATTTCTGGGCCCTAGGTTGCGTTCTATATGAATGTTATGCTGGAAGGCCTCCCTTTGTGGGAAGAGAGTTCACTCAGCTGGTAAAATCCATTATTTCAGATCCAACTCCATCCCTTCCTGGCAATCCAAGCCGTCCTTTTGTCAACTTAATCAACTCTCTATTGATAAAAGACCCTGCTGAACGATTGCGGTGGTCTGAGCTCTGCGGACATGCTTTCTGGAGAACAAAATTCACACCAATTCCTTTACCTGCACAGCCAGCCTTCCAGGATATGATAGAACAGCATGCTAAGCCATATCTTTCAGAACTTAATGTTGATAGATCTGCCCAGAACAAGACTCCCACCAAATTTCGTGAAAAGGACGTGAAAGGTGGTTCCAAGAATGACGAGAATTCTATATCTGGATTGAGAGGCCAAGAAACACCTATCAAGGGCACACCAACTGGTCGTCGAGCACAAACTAAGGGCTCTGGAAGAATAGTTGAAGACAAGCAGAAAGATCGTTCCAATGCAAGCAGGGGTGTGAACCTTTTACGACTCTCACGTTTAGCAAAATCAAATCTACAGAAGGAGAATGAGAAGGAAAATTACCGTCGCCCCTTACCCAATGGTTCTGAGAATAACTCTGAAGTGAAAATAGATAACACGGATATGGAACTTGATTTTAATGAGAACGAAGATGATGGTAATGACGAAAGTGAATGTTCTGAACATATGACTTGCGACGATAAATCATCATCAACGCCGATTCAGCATGCAACGAAAGGAGAAGACATGGAAAACAATACTAGCCAATCAGATACACAGTCTGCAGTCAGCGTTCCTTCCTCAGATGATTCAAGATCAGTTGAAATGGAGTCAACTCCTGAGCATTTTAACACATATGCTAACTCTCCTAACGTCAGTCCTTTGCTAAGGAAACATAGAAATAAAGAAGATTCCAGATCTACCCCTGAATCTGACCCTCGGTCCTCTACCAGTATTACACAGGTTCTCTGGCATCCTTCTGATCTGGCAGTTAGACCTGTAATGCCTAGCAGAAAGGTCGATAAATTGTCCGAAGTCGTCCCTCCACTTCCCTTTGAGGCTCTTCAAGCTTCTGATTTTGTGAGAATGTCTAAGGAGCAACTAGATATGCTCATCAATCGTATAATAGCAATCATTAGTGGAAGTGCAAGTAACGGAGAGAAACAGAATGTAATTAGATATCTTGAAATGTTGAGCAGCAATGCGGAAGCTGCTAATGTCTTGACCAATGGGCCAATAATGGCAGTTCTTGTAAAAATGCTTCGGCAGTCCAAGGCTTCAGCTCTGCGCGTTCAGCTTACTTGTCTGATTGGTCTGCTGATCCGACATTCTACCTTTATTGAAGATAATTTGGCAAATTCTGGAATTTTGGGTTCGATAGTTGATGGCCTTAGAGACAAACAGGAAAAAGTCAGAAGGTTTTCCATGGCTGCATTAGGTGAACTGCTATTCTACATATCCACTCAAAATGTGGAAAGCAGGGACAGGTCACTGGAATCACCATCAAAGGATACTAAGACTGCAACTGGCTGGCAGATTCCGAATTCGATTATAAGTTTTGTCTCATCAATTCTGAGAAAGGGTGAGGATGATATAACACAATTATATGCATTGAGAACCATTGAAAATATTTGCAGTCAAGGAGGTTCATGGGTGTGCCGCTTCAATTGTCAAGATGTAACAAATAACCTATGCTATATTTATAGAGCATCAGGTAAACAAGAGAGCATGAGGCTCACCGCAGGATCTTGCTTAGTTCGCCTGGTTCGTTTCAATCCTCCTAGCATTCAATCAGTCATGAGTAAAGTTTCTTTCAAAGAGCTTGCATCTACTTTGCAAAAGGGAAGTCCAAGAGAGCAGCAAATCGGCTTAAACCTGCTAAATATGGCATTGCACGGGAATCATACGCTTGCAAATGCAAGCAGGCACACTCTACCATTGTCCGAGGATAAGAATCTTGTAGCTAATCTTCTGTGCCTAGTTGAGCAGGGGAGTGAAGTACTGAAGGGAAAGACACTAGTCCTTATAGCTCTTCTGTGTAAAAATGGTAGGAGATGGCTTCCTCACTTCTTTTGCAACGCGAAATTACTTTCTGTGGTGGACAGGCTGGGAAAAGAGAAAGATGTATATGTCAAACAATGTTTAGAGGCACTTGTGCATGTTGTGGCTTCTACAATCCCTGGTTTATTGGACAATATAGTAGTAGATGTTCAGCATATGATAGGAGGAAGGCGCCATGGGCATATTTCTGCAATGTCAAGCAGATCTACTCCAAAGTCCGACGTCCATTTATTTCCGGTTGTTCTGCATCTTCTTGGCAGTTCATCTTTTAAGCAGAAGTTAGCGACTCAACAGGTTTTGCAGCAGTTGGCGAATATAATCAAGCTTATGGAGACACCATTTCAGGGTAGGGATGATCTCCAAATAACTATTCTTCGTGTTCTCGAGTCAATCACAGAAGAGCCTCATGTCATTGTTGAGAGGCATGGCATTTTTATTCATGATATTCTTCCTAGTTTGACTGTTCTTTATAAAGGAAACAAGGATGGGGATGCCAGATTCTTATGCCTTAAAATTCTATTTGATGTAATGGTCATTCTTTTGAATGAACCGTTGCATGATGAACAGCGATCAAAGGATCTAAAGTTCATCTCTAATATGTATTTCCTCCCTCTGTACCCCACCTTCATTGAAGATGAGCATGTTATTCCCATGTATGCTCAGAAGCTTCTTTTGATGCTTCTTGACTTCAACCATATCAAAATTCTTGACGTTCTGCAACTGAAGATAGTCTCCCAATGTTTTGAGTTCTTGCTCGGTGATCTTTCACTTGCAAATGTCAATAATGTCAAACTGTGTTTGGCCCTGGCATCCGCTCCAGAAATGGAGCCAAATATACTTTCTCAACTGAAAGTGGTTAGGAAAATCCTGAACCTGTTGGAGTTTGCATATGCAAAGGATATGGAAGAGTTTCTGGAACCAACTCTTGGACTTTGTAGAGCTTTTCTTCTTTCTTCAATCAACCGTAGAAAGGGCTTCTACTCTAAAGAACCAGATCTCTTGAGGGATCCTTCTGACCCAATTAGTGCAGTTGATTACCTTCAATGCGTAAGAGATATTGCAGATTTTGGCGGCAATTTGGGTGTCTTTCTGGAGTTAAGTGGAACTGCTGATGCCAACATTGCCGACATAGCTTCAGAATGTGTAGTGTTATTGATTAAGGCAGCTCCAAGGGAGGCTACTGCTGGTCTACTTACCAATCTTCCAAAGGTTTCTGTTATTCTTGCATCTTGGCTTAAGGGCACCTCCTGCTTATTGGTCGAGAGAATGCTTCATGCGTTAGGTTATGCTTGCGGGCAATACTTGTCGCAGCACATGATATTATCCATACCCATAACAGAGATTTCCAGAATTGAAGTGACTATTTCTGAACTCAAGTGTTCAGATGTGCCCAGTTTAGCCAATTCTGCAACGTTGGCCGCAATGGAGCTGCAACGGCTTCCTCGCTGCTTTTGA 4095 0.4195 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSIDKSHKSKVLQEVKILHALDHPNVLKFYSWYETSAHLWLVLEYCVGGNLMSLLQQDGQLPEDSIHDFAHDLVNALQFLHSNGTIYCDLKPSNILLDENGHIKLCDFGLARKLRDISNVPSSSLPQAKRGTPCYMAPELFEDGVVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPSLPGNPSRPFVNLINSLLIKDPAERLRWSELCGHAFWRTKFTPIPLPAQPAFQDMIEQHAKPYLSELNVDRSAQNKTPTKFREKDVKGGSKNDENSISGLRGQETPIKGTPTGRRAQTKGSGRIVEDKQKDRSNASRGVNLLRLSRLAKSNLQKENEKENYRRPLPNGSENNSEVKIDNTDMELDFNENEDDGNDESECSEHMTCDDKSSSTPIQHATKGEDMENNTSQSDTQSAVSVPSSDDSRSVEMESTPEHFNTYANSPNVSPLLRKHRNKEDSRSTPESDPRSSTSITQVLWHPSDLAVRPVMPSRKVDKLSEVVPPLPFEALQASDFVRMSKEQLDMLINRIIAIISGSASNGEKQNVIRYLEMLSSNAEAANVLTNGPIMAVLVKMLRQSKASALRVQLTCLIGLLIRHSTFIEDNLANSGILGSIVDGLRDKQEKVRRFSMAALGELLFYISTQNVESRDRSLESPSKDTKTATGWQIPNSIISFVSSILRKGEDDITQLYALRTIENICSQGGSWVCRFNCQDVTNNLCYIYRASGKQESMRLTAGSCLVRLVRFNPPSIQSVMSKVSFKELASTLQKGSPREQQIGLNLLNMALHGNHTLANASRHTLPLSEDKNLVANLLCLVEQGSEVLKGKTLVLIALLCKNGRRWLPHFFCNAKLLSVVDRLGKEKDVYVKQCLEALVHVVASTIPGLLDNIVVDVQHMIGGRRHGHISAMSSRSTPKSDVHLFPVVLHLLGSSSFKQKLATQQVLQQLANIIKLMETPFQGRDDLQITILRVLESITEEPHVIVERHGIFIHDILPSLTVLYKGNKDGDARFLCLKILFDVMVILLNEPLHDEQRSKDLKFISNMYFLPLYPTFIEDEHVIPMYAQKLLLMLLDFNHIKILDVLQLKIVSQCFEFLLGDLSLANVNNVKLCLALASAPEMEPNILSQLKVVRKILNLLEFAYAKDMEEFLEPTLGLCRAFLLSSINRRKGFYSKEPDLLRDPSDPISAVDYLQCVRDIADFGGNLGVFLELSGTADANIADIASECVVLLIKAAPREATAGLLTNLPKVSVILASWLKGTSCLLVERMLHALGYACGQYLSQHMILSIPITEISRIEVTISELKCSDVPSLANSATLAAMELQRLPRCF* 1365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01960 1364 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Pte2g01960 1364 FunFam Aurora kinase A 1 81 - -
Pte2g01960 1364 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1361 IPR044591 GO:0000911|GO:0000914|GO:0008017
Pte2g01960 1364 Gene3D Transferase(Phosphotransferase) domain 1 1 316 - -
Pte2g01960 1364 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01960 1364 MobiDBLite consensus disorder prediction 370 384 - -
Pte2g01960 1364 CDD STKc_ULK4 3 257 - -
Pte2g01960 1364 MobiDBLite consensus disorder prediction 296 311 - -
Pte2g01960 1364 SUPERFAMILY ARM repeat 559 985 IPR016024 -
Pte2g01960 1364 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pte2g01960 1364 MobiDBLite consensus disorder prediction 286 512 - -
Pte2g01960 1364 MobiDBLite consensus disorder prediction 489 503 - -
Pte2g01960 1364 MobiDBLite consensus disorder prediction 312 337 - -
Pte2g01960 1364 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01960 1364 FunFam Maternal embryonic leucine zipper kinase 1 297 - -
Pte2g01960 1364 ProSiteProfiles HEAT repeat profile. 649 687 IPR021133 -
Pte2g01960 1364 Gene3D - 557 1056 IPR011989 -
Pte2g01960 1364 MobiDBLite consensus disorder prediction 340 354 - -
Pte2g01960 1364 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01960 1364 MobiDBLite consensus disorder prediction 426 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01960 Pte-Chr2 39876528 39883033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01960 1 258 AGC Kinase Gene Family AT1G45160 34.708 1.88e-40 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Pte2g01960 Pkinase 1.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01960 K17545 - qsa:O6P43_021688 2035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01960 2 39876528 39883033 Pte2g01960 2 39876528 39883033 RCT