Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01954 ATGTTTGCTGTTGCTACAATGGCAGCAGAAACTTTGTACACCAAGTTGTCAACTTTGATGACCTCTGATCATTCAGCTGTGGTATCAATGAACATTTTTGTAGCTCTGCTTTGTGCTTGCATTATCATCGGCCATTTGCTGGAGGAAAATCGATGGATCAATGAGTCCATTACAGCATTAGTTATTGGTGTCTGCACTGGGATTATCATTCTGTATACAACCGGAGGCAAAAGCTCACGTATTTTGGTTTTCAGTCAAGATATTTTCTTCATTTATCTTCTACCTCCAATCATTTTCAATGCCGGGTTTCAAGTGAAGAAGAAGCAATTTTTTCGCAATTTCATGACTATCATCCTGTTTGGTGCAGTGGGTACTTTGATATCCTTTTGCATCATATCACTAGGTGCTGTACATATTTTCAGGAAAATGAATATCGGATCTCTCAAATTCGGGGACTTTCTTGCAATTGGAGCCATATTTTCTGCTACAGATTCTGTATGCACCTTGCAGGTTCTTAATCAGGATGAAACACCTTTGCTGTACAGCTTGGTCTTCGGGGAAGGTGTTGTAAATGATGCAACATCTGTCGTGCTTTTCAATGCAATTCAGCGATTTGATGACCTCTTCCACATGAGCTGGAGTATTGGCTTAAAGTTAGTTGGGAAATTCTTCTATCTCTTCATTGCAAGCACTGTTCTTGGAGTTCTTTCTGGACTTTTAAGCGCTTTCATCATCAAAAAACTTTACTTCGGAAGGCACTCCACTGATCGTGAGGTTGCTCTTATGATACTTATGGCATACTTGTCATATGTTCTAGCAGAATTATTAAAACTAAGCGGCATTCTCACTGTATTCTTTTGTGGCATTGTGATGTCTCATTACACATGGCACAATGTGACTGAGAGTTCAAGAGTGACAACCAAGCATACCTTTGCTACCATGTCATTTGTTGCTGAGATCTTTATCTTCCTATATGTTGGCATGGATGCATTGGATATTGATAAGTGGAAGTCTGTCAGTAGTAGCCCTGGAACATCGATAGGGGTGAGTTCAACAATTCTGGGACTAGTTATGATTGGAAGAGCAGCCTTTGTTTTCCCTTTGTCTTTCTTATCCAACTTGACCAAGAAATCTGAGAATGTAAAAATTGGATTCAAGCAACAAGTAACAATCTGGTGGTCTGGACTTATGCGCGGAGCTGTCTCCATGGCACTTGCTTATAACCGGTTTACAAAATCAGGTGAGACTAAAGTGCGTGGGAATGAAATCATGATTACAAGTACAATCACAGTGGTTCTCTTCAGTACTGTGGTCTTTGGCTTAATGACGAAGCCACTTATAAGAATCTTGCTTCCTCCATCAAAAAACATAATCATACTAAATTCCCCACCAGCTTCTCCTAAATCATTCACTGAGCCGCTTCTGGGTAATGGAGGTGATTCACCTGCAAGCCGCGTGCACCGTCCAAGTAGCCTACAGATTTTACTCAGTATTCCTACACAAGGTGTTCATCGATATTGGAGAAGGTTCGATGATGCTGTCATGCGACCTATCTTTGGTGGACGGGGTTTTGTGCCTTATGTTCCAGGGTCGCCTCTTGAGCAAAGTGTTCACCAATGGCAATGA 1626 0.4121 MFAVATMAAETLYTKLSTLMTSDHSAVVSMNIFVALLCACIIIGHLLEENRWINESITALVIGVCTGIIILYTTGGKSSRILVFSQDIFFIYLLPPIIFNAGFQVKKKQFFRNFMTIILFGAVGTLISFCIISLGAVHIFRKMNIGSLKFGDFLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQRFDDLFHMSWSIGLKLVGKFFYLFIASTVLGVLSGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYVLAELLKLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATMSFVAEIFIFLYVGMDALDIDKWKSVSSSPGTSIGVSSTILGLVMIGRAAFVFPLSFLSNLTKKSENVKIGFKQQVTIWWSGLMRGAVSMALAYNRFTKSGETKVRGNEIMITSTITVVLFSTVVFGLMTKPLIRILLPPSKNIIILNSPPASPKSFTEPLLGNGGDSPASRVHRPSSLQILLSIPTQGVHRYWRRFDDAVMRPIFGGRGFVPYVPGSPLEQSVHQWQ* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01954 541 PANTHER SODIUM/HYDROGEN EXCHANGER 20 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pte2g01954 541 Pfam Sodium/hydrogen exchanger family 32 447 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pte2g01954 541 Gene3D - 149 201 - -
Pte2g01954 541 NCBIfam sodium/hydrogen exchanger 3 30 450 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte2g01954 541 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte2g01954 541 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte2g01954 541 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte2g01954 541 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01954 Pte-Chr2 39804421 39809862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01954 11 539 Antiporters AT3G05030 71.004 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01954 - - gmx:100791224 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01954 2 39804421 39809862 Pte2g01954 2 39804421 39809862 RCT
Pte3g00841 3 6846224 6850232 Pte2g01954 2 39804421 39809862 RCT