Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01952 ATGGGTTGTGTGTTTGGGAAGCAGGCATCAGCTAAGTCAGTTGAACAGACTGTGGTAGAGACAGAGAGAGTTGTGGAGGAGAGGAAAGATAAAGGTAGAGCTGCAAAAGTTGAAGTGGCTGAGGTTCCCAATGGTGCGCATCGTAAGGAGGTTGAAGAGGAGAGGAGTGCAAAACCGAGAGGAGAGAGGAGGAGATCTTCAAAGCCAAATCCCAGATTGAGTAACCCGCCTAACCACGTTTATGGTGAGCAAGTGGCAGCTGGGTGGCCCTCTTGGCTCTCAAAGGTTGCTGGGGAAGCTATTAACGGTTTAACACCCAGAAGGGCAGATTCCTTTGAGAAGCTTCATAAGATTGGACAAGGTACGTATAGTAATGTATACAAAGCTAAGGATACGATGACAGGGAAAATTGTTGCCCTGAAGAAGGTCCGTTTTGACAATTTGGAGCCTGAGAGTGTGAAGTTCATGGCAAGAGAAATCCTCATTCTACGCCGTCTGGATCATCCAAATGTGGTCAAATTGGAGGGGTTAGTTACTTCAAGAATGACTTGTAGTTTATATCTTGTTTTTCAGTACATGGAGCATGATTTGGCTGGACTTGCAACGAATCCAGCAATTAAGTTCACAGAATCTCAGGTTAAATGTTATATGCATCAGCTGTTTTCTGGGCTAGAACATTGCCATAACCGTCATGTGCTTCATCGTGATATAAAGGGTTCAAATCTTCTAATAGACAATGATGGAATTCTAAAGATTGCGGACTTTGGATTGGCTTCTTTTTTTGATCCTAATCACAAGCATCCCATGACTAGTAGAGTAGTCACTTTATGGTATCGGCCTCCAGAACTTCTTCTTGGAGCTACTGACTACGGTGTTGGTGTTGATCTCTGGAGTGCTGGCTGCATTCTAGCTGAGTTATTGGCTGGAAAACCTATCATGCCCGGCCGGACGGAGGTTGAGCAGCTACACAAGATATTTAAGTTGTGTGGTTCTCCCTCTGAAGAGTATTGGAAAAAATCAAAGTTGCCGCATGCAACCCTTTTCAAGCCTCAGCAGACACATAGACGATGCATACAAGAGACGTTTAAAGATTTTCCACCTTCATCTTTGCCCCTAATTGAGGCCCTTCTTGCAATTGATCCAGATGAACGTCAGACTGCAACTGCTGCACTGAAAAGTAAATTCTTCACAACAAAACCATATGCTTGTGATCCTTCTAGCCTTCCAAAATATCCACCAAGTAAAGAAATGGATGCAAAGCTCCGGGATGAAGAAGCTAGAAGGTTGTTTTCTTTCCTTTGGCCTTCTTGTGCAGTGCATTATATCTTCATTGAGAGTTTGGATAACGGGGTCCAGCACAGCAATAATGTTTTTTCTAATTATTTGGTTCACTTCTCCATCCTTGGTTTCTGTATTCTGAAATGA 1425 0.4344 MGCVFGKQASAKSVEQTVVETERVVEERKDKGRAAKVEVAEVPNGAHRKEVEEERSAKPRGERRRSSKPNPRLSNPPNHVYGEQVAAGWPSWLSKVAGEAINGLTPRRADSFEKLHKIGQGTYSNVYKAKDTMTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMTCSLYLVFQYMEHDLAGLATNPAIKFTESQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGILKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATLFKPQQTHRRCIQETFKDFPPSSLPLIEALLAIDPDERQTATAALKSKFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLFSFLWPSCAVHYIFIESLDNGVQHSNNVFSNYLVHFSILGFCILK* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01952 474 CDD STKc_CDK9_like 112 396 - -
Pte2g01952 474 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01952 474 Pfam Protein kinase domain 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01952 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Pte2g01952 474 MobiDBLite consensus disorder prediction 23 81 - -
Pte2g01952 474 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Pte2g01952 474 FunFam probable serine/threonine-protein kinase At1g54610 195 432 - -
Pte2g01952 474 Gene3D Transferase(Phosphotransferase) domain 1 195 431 - -
Pte2g01952 474 MobiDBLite consensus disorder prediction 23 69 - -
Pte2g01952 474 FunFam probable serine/threonine-protein kinase At1g54610 99 194 - -
Pte2g01952 474 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01952 474 SUPERFAMILY Protein kinase-like (PK-like) 107 403 IPR011009 -
Pte2g01952 474 PANTHER CELL DIVISION PROTEIN KINASE 110 400 - -
Pte2g01952 474 Gene3D Phosphorylase Kinase; domain 1 100 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01952 Pte-Chr2 39785001 39788646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01952 107 428 Core Cell Cycle Gene Families AT5G10270 51.479 1.35e-114 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte2g01952 Pkinase 1.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01952 K08819 - qsa:O6P43_003509 778.089