Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01944 ATGGGTGGGTGCTTTCCTTGTTTTGGATCATCCATCAAGGACGGGAGTGCTGTCAAGAAATTGGCTAAGAAGGACTCAATCAAAGAGAGCTCAGCTGCTCAGTCTCATCACGTCAACCGTGTTTCTTCAGATAAATCAAAGTCTCGTGGTGGTTCTGATGCTAAGAAGGAATTGCCTATTCCAAAGGATGGACCAACAGCACATATTGCCGCACAGACATTTACTTTCCGAGAGCTTGCTGCTGCTACAAAGAATTTCCGACCAGAATGTTTGTTAGGAGAAGGAGGGTTTGGGCGTGTTTATAAAGGTCACATGGAGAGTACAGGACAAGTGGTAGCCATAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGGGAATTTCTGGTGGAGGTTCTGATGCTTAGTCTATTACATCACCCAAATCTTGTGAAATTAATTGGATATTGTGCAGATGGTGACCAGCGCCTCCTTGTGTATGAATTTATGCCCCTGGGTTCTTTGGAGGATCATTTACATGATTTTCCCCCAGATAAAGAGCCTCTAGACTGGAACACAAGGATGAAGATAGCAGCTGGTGCAGCCAAAGGTTTGGAGTATCTGCATGATAAAGCTAACCCTCCGGTCATATATAGAGATTTAAAATCATCAAACATTCTTCTTGACGAGGGCTTTTATCCCAAGCTATCAGATTTTGGGCTCGCAAAACTGGGTCCTGTTGGTGATAAGACTCATGTTTCAACACGAGTGATGGGAACATATGGTTACTGTGCACCGGAATATGCAATGACTGGCCAGTTAACTCTTAAATCTGATGTCTACAGTTTTGGAGTGGTGTTTCTTGAACTTATTACTGGTCGCAAGGCTATCGATAACACTCGTGCTCCAGGAGAGCATAATCTTGTTGCATGGGCAAGACCACTTTTCAAGGACCGTAGAAAGTTCCCTAAAATGGCTGATCCTCTACTTCAAGGTCGCTATCCAATGCGAGGACTCTACCAAGCCCTAGCAGTTGCTGCAATGTGCCTGCAGGAACAAGCTGCAACAAGACCTCTAATAGGGGATGTTGTGACAGCTCTTACTTATTTGGCCTCCCAAACGTATGATCCAAATGCTTCCGCTGCTCAGAATAACAGGGTTGATCCATCAACTCCTAGAAGCCGTGACGAAAGAAGAAGTATGGCTGATGGCCTGGACAGTCCTGATGACCGTAGGGGGCGACATGGTTCCCCTTCCAGCCATGTAAGCTCACCTGACTTCAGGAAGAAAGATGGTAGAGAATCGAATGCTGGTAAAGAATTAGGCAGGGCTGAATCCAGTGGCGGCTCTGGAAGAAAATGGGGATTGGATGATTTAGAAAGACCTGGATCTCAGAGAGACAGTCCTCTAAATGCTGGAAGAGCTAAGGAAACTCCAAGAAACCGTGACTTAGACCGAGAACGAGCTGTGGCAGAGGCCAAAGTATGGGGTGAGAATTGGAGAGAAAAGAAACGTGCAAATGTGATAGGCAGCTTTGATGGTACAAATGAGTAG 1533 0.4573 MGGCFPCFGSSIKDGSAVKKLAKKDSIKESSAAQSHHVNRVSSDKSKSRGGSDAKKELPIPKDGPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGHMESTGQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVKLIGYCADGDQRLLVYEFMPLGSLEDHLHDFPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFYPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNASAAQNNRVDPSTPRSRDERRSMADGLDSPDDRRGRHGSPSSHVSSPDFRKKDGRESNAGKELGRAESSGGSGRKWGLDDLERPGSQRDSPLNAGRAKETPRNRDLDRERAVAEAKVWGENWREKKRANVIGSFDGTNE* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01944 510 FunFam Serine/threonine-protein kinase PBS1 59 162 - -
Pte2g01944 510 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01944 510 MobiDBLite consensus disorder prediction 372 480 - -
Pte2g01944 510 MobiDBLite consensus disorder prediction 40 62 - -
Pte2g01944 510 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01944 510 SUPERFAMILY Protein kinase-like (PK-like) 72 374 IPR011009 -
Pte2g01944 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Pte2g01944 510 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Pte2g01944 510 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Pte2g01944 510 Pfam Protein kinase domain 91 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01944 510 Gene3D Transferase(Phosphotransferase) domain 1 163 383 - -
Pte2g01944 510 PANTHER OS07G0668900 PROTEIN 4 373 - -
Pte2g01944 510 MobiDBLite consensus disorder prediction 383 410 - -
Pte2g01944 510 MobiDBLite consensus disorder prediction 27 65 - -
Pte2g01944 510 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Pte2g01944 510 MobiDBLite consensus disorder prediction 417 433 - -
Pte2g01944 510 CDD STKc_IRAK 92 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01944 Pte-Chr2 39718814 39724112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01944 66 385 Glycoside Hydrolase AT3G07070 71.562 2.15e-168 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte2g01944 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01944 - - qsa:O6P43_021706 922.154