Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01933 ATGGATTCTTCTGGGGCTGCTTCAGAAGGAAAAAATCCAAAGAGAGACGAGAGTCCTGATAAGAATGATGATGGTGATACTGTCGGAAATAGCAACAATAGTAAGATTGTAAATTCCAACGAAGGACAGAGCAAGCCAAAGCGTCAGATGAAGACGCCATTTCAGCTTGAAGCTCTGGAGAAAGCTTATGCTATGGAGACATACCCATCGGAATCAATTAGAGCAGAGCTATCTGAGAAATTGGGATTGACGGATCGACAGTTGCAGATGTGGTTTTGTCATAGAAGGTTGAAAGACAAGAAGGATTTGCCTTTTAAGAAACAGAAGAAGACAACGGCTGCTTTGCCAGATTCTCCAGTAGATGACTTGAGGCTGGGGCCAGATTTGGGTACTGACTATGGGTCGGGTTCAGCTTCTCGTTCTAGCCCTTATGGCCGAACTGGAGTATCTCGTGGCCTAGCAGGGTATTATGAGTCTCCACAGTCTCTGTTGGAACTTAGAGCAATTGCTTGTGTTGAAGCACAGTTGGGGGAGCCAATGAGGGAAGATGGACCTATTTTAGGAATAGAATTTGATCCATTGCCGCCTGATGCTTTTGGAACTCCTTTAGTTGTAGAACAGCAGCAGCGACCTGGGCTTGCTTATGGCGGGAAGCTATTTGATCGGCTTGATGTGAAGCCAAATAAGACTAGTGGCCAGGCTCTTCAAGAATATCAGTTTTTTCAGAATCCATCCAGCGTTATGCCTGATACATATGGACAAATTGCACCATCCTTACGCGATCCAATAATGGATGGTTCTTCTGCCAGAACTCAATCATTTATGGTCGGTAATGATCTTTTACCCAGAGTTCATACTGTGCAAGGCCATTCTTCTCGTGATCGTATTTTGTCTCAGCAAAATAAGCAGGGCATTGCCTATTCATCACCCCCACGAGATGACTATCCCGCCCAAAGGGATTCTCTAACAATTACAAACATGGGAATAAATTCGCACTTTAGTGATCACCCAGTTGTTAAATCAGAACCATATGCAGTACCATCGGGTCATTTTTACAATAATGATGCTATGCCTAGGATGGATAGGAAATGGAAGAGTGAGGACACTAGAACTGCAAGAGAAGTAGAAGCCCATGAAATCAGGATGGGAAAGGAGCTTGAGAAGCAAGATATCTTGAGGCGAAAGAATGAAGAAAGAATGAGGAAAGAAATGGAGAGACAAGACCGTGAAAGGCGAAAGGAAGAAGAGAGACTGATGCGTGAAAAACAACGAGAGGAAGAAAGATCAAAAAGAGAGCAGAAACGTGAGATGGAAAGAAGGGAAAAATTTTTGTTGAAGGAACATTTAAGGGCTGAAAAGAAGAGGCAAAAGGAAGAGCTGCGCAAGGAGAAAGAGGCAGAAAGAAGAAAAATTGCTCTCGAGAAGGCAACTGCTCGCAGATTAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAGCTAGAATTAATGGAATTGGCTGCTGCAAGCAGATGTTGTGGTTGTGAATTTTGGGAGGAAAACTTCTCCATTTTGGTATTTTGGTGTTTGAGATCAAGTTCTCTGACTTTGTTCCCACCAAGAGGTGTAAAGTTGAAAAAGCCATTTACTATTCAGCCCTGGGTTAACTGTGAGGAGAATATTGGCAATCTTCTCATGGTTTGGAGATTCTTAATTACTTTCACTGATGTTCTGGGATTGTGGCCTTTTACACTTGATGAGTTCATTCAAGCATTTCATGACTATCAAATCTGGTATCTGGTATACAGGATTCTAGATTGTTGGGTGAGGGTACATGTTGCACTTCTTAAGGTGATAATAAAAGATATTGAGGACATAGCTAGGACGCCTACTGGAATTGGAGCGAATCAGAATGGTTCTGCTAATCCTGGGGGTGGACACCCTGAGATTATTGAAGGGGCATTTCATGTTCTGTCGCTCGAGGGGAGCAAAGGATTAACAGTGTTGGAACTTGCTGAAAAGATTCAGAAGCCCGAAAGAAAATTCAAATATTTGCAAATGGGGCCCTGCCCTGCTGAAGATGTTGATGATGTTGAAAGGGATGAAGAATCTGAAAGTGATGATGAGGATACTGAAGTGGATGAGTTGGTTACTGCTACTGATGAGAATAAAACAACCGAACAATATGAAGATATGAACCCTTGCTCAAGCGATGGAAAAGAAAATTTAAGCAATGAAATCAAACTAAATCTTCAAAATGAGTTTGATAAAGTGACTTCATTTGCTGAGAATGGCACCAAAATTGTTGATTGTCAAGATGAAATTATCGAGCCACCTGTTGTTGAAGATGTCCATAAAGATAACATCGATCAGAATGACCTGGAAATTGATGAGAGCAAGTCTGGGGAGTCATGGATTCAAGGGCTGACAGAAGGGGATTATCCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTGGCTTTGGTTGGTGTTGCCAAATGA 2484 0.4231 MDSSGAASEGKNPKRDESPDKNDDGDTVGNSNNSKIVNSNEGQSKPKRQMKTPFQLEALEKAYAMETYPSESIRAELSEKLGLTDRQLQMWFCHRRLKDKKDLPFKKQKKTTAALPDSPVDDLRLGPDLGTDYGSGSASRSSPYGRTGVSRGLAGYYESPQSLLELRAIACVEAQLGEPMREDGPILGIEFDPLPPDAFGTPLVVEQQQRPGLAYGGKLFDRLDVKPNKTSGQALQEYQFFQNPSSVMPDTYGQIAPSLRDPIMDGSSARTQSFMVGNDLLPRVHTVQGHSSRDRILSQQNKQGIAYSSPPRDDYPAQRDSLTITNMGINSHFSDHPVVKSEPYAVPSGHFYNNDAMPRMDRKWKSEDTRTAREVEAHEIRMGKELEKQDILRRKNEERMRKEMERQDRERRKEEERLMREKQREEERSKREQKREMERREKFLLKEHLRAEKKRQKEELRKEKEAERRKIALEKATARRLAKESMELIEDEQLELMELAAASRCCGCEFWEENFSILVFWCLRSSSLTLFPPRGVKLKKPFTIQPWVNCEENIGNLLMVWRFLITFTDVLGLWPFTLDEFIQAFHDYQIWYLVYRILDCWVRVHVALLKVIIKDIEDIARTPTGIGANQNGSANPGGGHPEIIEGAFHVLSLEGSKGLTVLELAEKIQKPERKFKYLQMGPCPAEDVDDVERDEESESDDEDTEVDELVTATDENKTTEQYEDMNPCSSDGKENLSNEIKLNLQNEFDKVTSFAENGTKIVDCQDEIIEPPVVEDVHKDNIDQNDLEIDESKSGESWIQGLTEGDYPDLSVEERLNALVALVGVAK* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01933 827 ProSiteProfiles 'Homeobox' domain profile. 42 102 IPR001356 GO:0003677
Pte2g01933 827 MobiDBLite consensus disorder prediction 1 54 - -
Pte2g01933 827 SUPERFAMILY Homeodomain-like 30 101 IPR009057 -
Pte2g01933 827 SMART testlast3 551 618 IPR018501 -
Pte2g01933 827 MobiDBLite consensus disorder prediction 287 319 - -
Pte2g01933 827 MobiDBLite consensus disorder prediction 104 146 - -
Pte2g01933 827 Pfam Homeodomain 45 101 IPR001356 GO:0003677
Pte2g01933 827 ProSiteProfiles DDT domain profile. 551 618 IPR018501 -
Pte2g01933 827 SMART HOX_1 44 106 IPR001356 GO:0003677
Pte2g01933 827 Coils Coil 392 477 - -
Pte2g01933 827 MobiDBLite consensus disorder prediction 387 437 - -
Pte2g01933 827 Pfam DDT domain 552 615 IPR018501 -
Pte2g01933 827 CDD homeodomain 47 101 IPR001356 GO:0003677
Pte2g01933 827 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 30 647 IPR044977 GO:0006357
Pte2g01933 827 MobiDBLite consensus disorder prediction 25 50 - -
Pte2g01933 827 MobiDBLite consensus disorder prediction 9 24 - -
Pte2g01933 827 MobiDBLite consensus disorder prediction 291 307 - -
Pte2g01933 827 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 794 824 IPR028942 -
Pte2g01933 827 MobiDBLite consensus disorder prediction 688 707 - -
Pte2g01933 827 MobiDBLite consensus disorder prediction 682 707 - -
Pte2g01933 827 MobiDBLite consensus disorder prediction 362 381 - -
Pte2g01933 827 Gene3D - 29 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01933 Pte-Chr2 39602822 39608932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01933 646 826 Homeobox Transcription Factor Family AT5G44180 32.922 4.92e-17 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pte2g01933 DDT 6.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01933 - - gmx:100777465 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01933 2 39602822 39608932 Pte2g01933 2 39602822 39608932 RCT