Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01930 ATGGGTAAGCGCTCCAAGAGCAATTGCAAGTCAGCATCACACAAACTTTTCAGGGACAAGGCTAAGAACCGGGTCGATGATCTGCAAGGTATGTTTATGGATTTGCAATTTGCCAGGAAGGAGAGTCGTACTATAGATGTTGCCGTTCTTGAGGAGCAAGTCCATCAAATGCTTCGTGAGTGGAAAGCTGAGCTCAATGAACCATCTCCCGCTTCATCTTTGCAACAAGGCGGGAGTCTTGGGTCATTTTCAACCGACATCTGTCGGTTACTAAGGCTTTGTGAGGAGGAAGATGATGATGCCATAAGTCCTTTGGCTGCCCCAAAACCTGAGCCCAATGACCAGAGTCTACATGTTGGAGATAAAGCAGTCTTTCAAGAGGGTCTTACTGTGAGTCAAGATCAACAAGAACATGATTTTCCATTGGTTAATGAATGCAAAAGCTCTAGAGTTGTCAGCAACTTGGATGCCAGCCATTTAGATTATCAGCAGTTGAATTTTCATCAAGACTTTGACCCCAATTTCTATCCTGCTCTTACTGAGGCTTGTTTCTATGGGGAACATACAATGCCTCATATATCTAATTATCTGCCAAGTATGTTCCCTCCACCATCTGCATTTTTAGGTCCAAAGTGTGCACTTTGGGACTGTCCGAGGCCTGCAAATAGGTCAGACTGGTGCCAAGACTACTGTAGTAGCTTTCATGCTGCTTTAGCTCTAAATGAAGGGCCACCTGGTATGAGCCCTGTTGTGCGACCTGGGGGTATTGGCCTGAAGGACAATTTGCTCTTTGCTGCTCTTACTGCGAAGGCAATGGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCTGCAACTGCAAAATCTCCCTGGAATGCACCTGAATTGTTTGATCTGTCTGTTCTGGAAGGAGAAACGATGAGAGAGTGGCTCTTCTTCGATAAACCACGTAGGGCTTTTGAGAGTGGAAACAGAAAACAGAGGTCATTGCCAGATTACAGTGGACGTGGATGGCATGAATCAAGAAAGCAAGTTATGAGTGAATTTGGAGGGCTGAAGAGATCCTACTACATGGATCCACAACCAATGAACCACTACGAGTGGCACCTTTATGAATATGAGATTAGCAAATGTGATGTATGCGCGTTATACCGGTTGGAACTGAAGCTTGTTGAGGGGAAAAAGAACGCCAAAGCAAAGATAACAAGTGATTCAGTTAGTGATTTGCAGAAGCAGATGGGAAGGCTGTCATCTGAGTTTCCAGCTGACAACAAGCGTTCTGCAAAAGGCAGGGCAAAGTTTAATGCCAATGTTGGCAGTGGCAATATTTATTCAGCTTCAGGTAGGGTGGTTCCAACAGATGCAACATATGAATATGGTCCAACTGCACCGAGTGACTATCTTCTTGAGAACTTAAATGGTTATTACATAACGTGA 1437 0.4475 MGKRSKSNCKSASHKLFRDKAKNRVDDLQGMFMDLQFARKESRTIDVAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLRLCEEEDDDAISPLAAPKPEPNDQSLHVGDKAVFQEGLTVSQDQQEHDFPLVNECKSSRVVSNLDASHLDYQQLNFHQDFDPNFYPALTEACFYGEHTMPHISNYLPSMFPPPSAFLGPKCALWDCPRPANRSDWCQDYCSSFHAALALNEGPPGMSPVVRPGGIGLKDNLLFAALTAKAMGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETMREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMSEFGGLKRSYYMDPQPMNHYEWHLYEYEISKCDVCALYRLELKLVEGKKNAKAKITSDSVSDLQKQMGRLSSEFPADNKRSAKGRAKFNANVGSGNIYSASGRVVPTDATYEYGPTAPSDYLLENLNGYYIT* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01930 478 PANTHER TRANSCRIPTION FACTOR VOZ1 1 473 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01930 Pte-Chr2 39579400 39583213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01930 2 477 VOZ-9 Transcription Factor Family AT1G28520 68.980 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Pte2g01930 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01930 - - qsu:112020124 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01930 2 39579400 39583213 Pte2g01930 2 39579400 39583213 RCT