Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01928 ATGGATAGAAGTACTCAAGTGATTCTGCTGGTTCTTTTCTTCAAGTTTCTGGATGTCACAGCACAGAGTACAGATCCTCAAGACTTTGGTGCTTTAAGGGGTCTTAGTGATAATTGGCAAAACACACCACCAAATTGGGTGGGAGCAGATCCTTGTGGAACTGGTTGGGCAGGAATCACATGCACCAATTCAAGGGTGACGTCCATAACACTGCCAAACATGGATTTAGAGGGCTCACTAACAGCAGATATCCTGAAATTAACCGAACTAGTAACTCTGGATCTTTCTAACAATCAAGACCTAGGAGGAACCATTCCGCAAGGAATAGGAAGTTTGAAGAAGCTAAGTACCTTAATCCTGGTTGGTTGCAATTTCCTTGGCCCTATTCCAAATTCAATTGGATCTCTTAAACAGCTAAGCTTTCTAGCATTAAATTCGAACAAATTCAGTGGACCTATTCCTCCGAGTATTGGCAATCTAATCGATCTTACTTGGCTTGATCTTGCTGATAATGAACTTGAAGGACCTATCCCAGTGTCTGACGAGAACTCACCCGGTCTAGATATGCTGGTGAAGACTCTTCATTTGCTCTTGAATGACAACCAGCTAAATGGATTCATTCCCATGTCTTTAGCAACAGTAAAATCCTTGCAAGTGGTGCGTTTGGATGGGAACCAATTGAGCGGAGCAGTGCCTTCAAATATTAACAAACTTGCAAATCTCAATGAACTTTATTTATCGAACAACAAGCTCAATGGATCTCTGCCTGATCTGAGAGGCATGAACCAGCTCAACTATTTGGACACGAGCAACAATACATTCAATGCTTCATCTATCCCTCCATGGTTTTCAAGCTTACCGTCCATGACAACATTAATAATGCAGAACACAGGACTCCAAGGGAAAATTCCTGTTTCCTTATTCAATCTAACAAGTTTAGAGTCTGTGGTGTTGAGGGACAATAAGCTTAATGGGGCACTGGACATTGGTACTGATTTCAGCAGCCAATTACAACAAATCGATTTGGGGAACAATTTAATCACTGACTTGAAGCAAAAAACAACCAGTGTTACAATAATACTTTTTGGAAACCCAATATGTTTGGAAACGGGAGCATCATCACACAGTTACTGCCAAGACACCAAAATAACTTATAAATACACAACCCCAGCTAATTGTGGACCAGTTTCCTGCAATTCCAATCAGATTTCAAGTCCTAACTGTAAATGTGCACATCCATTCACAGGGACCATTTTCTTCAGAGCACTTGGCTTCTCAAACCATGACAACTCAACTTACTATCTGGCTCTTCAGCAGTCTCTCATGACTGCCTTTCAGTCCCAAAACTTACCAGTGGATTCAGTTTCGATCAGTGATCCATTCATGAACGACGTCGGCTATTTTGGATTGAACCTTGCAGTTTTCCCTTCACAACAAGATCGGTTTAATAGAACAACAATAATAAATCTTGGTTTTGTCTTTAACAGTCAGATTGTCAAACCACCAAAATTTTTCAGACCTTACTATTTCATTGCGAACAATTATGAGAACTATGCAGGAGAACTCTCCGTGTCAAAGAAGTCATCAAACAAGAGAATTATAGCTGGTACAGTATCTGGTATTACCATTAGTCTGCTACTGGCAACGCTTTTCGGGTTATATGCATTTCGAAAGAAGAAGAGAGCAGAAAAATCAATGGAAATGAACCCTTTTGCACACTGGAAAATGGACAAGAACAATGGGAATGCTCCTCAGTTAAAAGCAGCGAGATGGTTTTCATTTGAGGAGCTTAGCAGATATACCGACAAATTTTCAGATGCAAATGATATTGGGGCTGGGGGATATGGCAAGGTTTATCGAGGTACACTTCCCTCCGGTGAAGTAGTCGCCATTAAAAGGGCTCGGCAAGAATCCATGCAAGGTGCACTCGAGTTTAAAACTGAGATTGAACTTTTATCCAGAGTCCATCACAAGAATCTAGTTGGTCTTGTTGGTTTCTGCTTTGAGAAAAGTGAACAGATTCTGGTATATGAGTACATCTCCAAAGGAACTCTAATGGACAGTATTTTAGGTAATGTGAACAACCTATCCATTTCAAGACATGGGTACTTGGATCCTGAATATTACATGACCACACAGCTGACTGAGAAGAGTGATGTTTATAGCTTTGGAGTTGTGATGCTGGAGCTGATTACAGCTAGAAAGCCAATAGAACATGGAACATATATTGTGAGGGAGGTCTTGAAGGTGCTGGACAGGTCAAAAAACCTGTACAACCTTCATGACATTCTTGATCCATACATAAGAGGAACAGACCTGAAAGGCTTGGAGAAGTTCGTTGATCTTGCAATGAGGTGTGTGAATGAGTCTGGAGATAAGAGACCTACAATGGCTGATGTGGTCAAAGAGATTGAGGATATAATGCAGCTTCTTGGTTTGTACCCCAGTACCGAATCATCATCATCCATAACAAAGCCTAAAATGATAGCAACTAATGACAACATCCATGAGTCTGTTGAGGATTTCAGCTACAGTGGGGGTTTTCCAACCATGAAGATAGAACCCCTCTGA 2571 0.41 MDRSTQVILLVLFFKFLDVTAQSTDPQDFGALRGLSDNWQNTPPNWVGADPCGTGWAGITCTNSRVTSITLPNMDLEGSLTADILKLTELVTLDLSNNQDLGGTIPQGIGSLKKLSTLILVGCNFLGPIPNSIGSLKQLSFLALNSNKFSGPIPPSIGNLIDLTWLDLADNELEGPIPVSDENSPGLDMLVKTLHLLLNDNQLNGFIPMSLATVKSLQVVRLDGNQLSGAVPSNINKLANLNELYLSNNKLNGSLPDLRGMNQLNYLDTSNNTFNASSIPPWFSSLPSMTTLIMQNTGLQGKIPVSLFNLTSLESVVLRDNKLNGALDIGTDFSSQLQQIDLGNNLITDLKQKTTSVTIILFGNPICLETGASSHSYCQDTKITYKYTTPANCGPVSCNSNQISSPNCKCAHPFTGTIFFRALGFSNHDNSTYYLALQQSLMTAFQSQNLPVDSVSISDPFMNDVGYFGLNLAVFPSQQDRFNRTTIINLGFVFNSQIVKPPKFFRPYYFIANNYENYAGELSVSKKSSNKRIIAGTVSGITISLLLATLFGLYAFRKKKRAEKSMEMNPFAHWKMDKNNGNAPQLKAARWFSFEELSRYTDKFSDANDIGAGGYGKVYRGTLPSGEVVAIKRARQESMQGALEFKTEIELLSRVHHKNLVGLVGFCFEKSEQILVYEYISKGTLMDSILGNVNNLSISRHGYLDPEYYMTTQLTEKSDVYSFGVVMLELITARKPIEHGTYIVREVLKVLDRSKNLYNLHDILDPYIRGTDLKGLEKFVDLAMRCVNESGDKRPTMADVVKEIEDIMQLLGLYPSTESSSSITKPKMIATNDNIHESVEDFSYSGGFPTMKIEPL* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01928 856 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Pte2g01928 856 Gene3D Ribonuclease Inhibitor 183 258 IPR032675 -
Pte2g01928 856 SUPERFAMILY Protein kinase-like (PK-like) 590 821 IPR011009 -
Pte2g01928 856 ProSiteProfiles Protein kinase domain profile. 604 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01928 856 FunFam Leucine-rich repeat family protein 27 182 - -
Pte2g01928 856 Pfam Protein tyrosine and serine/threonine kinase 608 692 IPR001245 GO:0004672|GO:0006468
Pte2g01928 856 Pfam Protein tyrosine and serine/threonine kinase 703 803 IPR001245 GO:0004672|GO:0006468
Pte2g01928 856 FunFam Leucine-rich repeat protein kinase family protein 571 679 - -
Pte2g01928 856 ProSiteProfiles Leucine-rich repeat profile. 240 262 IPR001611 GO:0005515
Pte2g01928 856 Gene3D Phosphorylase Kinase; domain 1 574 677 - -
Pte2g01928 856 Gene3D Transferase(Phosphotransferase) domain 1 678 814 - -
Pte2g01928 856 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
Pte2g01928 856 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 184 276 - -
Pte2g01928 856 Gene3D Ribonuclease Inhibitor 259 402 IPR032675 -
Pte2g01928 856 SUPERFAMILY L domain-like 35 368 - -
Pte2g01928 856 PANTHER RECEPTOR-LIKE PROTEIN 55 701 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01928 Pte-Chr2 39559542 39564508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01928 4 809 Receptor kinase-like Gene Family AT1G79620 39.617 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pte2g01928 PK_Tyr_Ser-Thr 5.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01928 - - cave:132190816 886.33