Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01925 ATGAAAGCTTTTCTTGACCCAAAGTTGAAGAGTATAGAGTTGCAACATGGTGTTAGCTTCGCATCAGCTGGTTCTGGGTTCGATGATTTTACTGCCAACATTTCGAATGTATTACCAGTTTCCAAACAGCTAGAATACTTTCTGCATTACCAGATCCATCTGAGGCAATTGGTTGGTGAGGACAAGGCAGATTCCATAATTAAGAATGCAATATTTGTTGTGAGTATGGGCACAAATGACTTCCTACAAAATTATTACATCGATCCTACAAGACCTAAGCAGTTCACGTTGGAACAGTATGAGAACTACCTGGTATCCCTTATGGCACATTACGTTGAAGTGATGCACAAACAGGGAGGAGCTAGTAGGTTAGTAGTAGTTGGAGTGGCACCAATAGGGTGCTTGCCACTCGTCAAGACCATCATGGGTCAAAATGATTGTGTGGAAAATTATAACAAAGCAGCTTATTCATTCAACTCCAAAGTAGAAGCGAAGCTGGCACAGATCAGATCAACCCTAGGCATGAAGGCTGTCTTAGTGGATATCTATGGCATTCTGAGGGATGCAATCACTAATCCTACAAAATATGGTAGTACATACACACATACATACATCTTCATTGAAACTTCAAAGCGATGCTGTGGGACTGGAACTGTAGAATATGGAGATTCATGCAAAGGGATGAGTATCTGTACAGATCCTACCAAGATGGCAATTCATGGAAATTTCCAAGCTGAATCAGGAGGCATTCTTGAGAACGTTTGGGCAAGTTTTGTAGGTGATGATGTAGCTGGAAGAGGAAAAGGACATGCACAAGAATTTAATCTCAACTCCTGGGAAGAACTACCAAACCTTGATTGTGGAGATGAACCTACGAAAATGCTGGAAAGGCTTCCAAGTTTAGGTAGGTGGATATCAATGGGAGCTGACGAATGGGAGGAGCTCTTGAATACTTCACTGTCTGCAAGCAATAGAGAACAATATTCCTGCAATGATCGTTTGGCAGATAACATTATTGCAAATGATATGAACAAGAAAGCAAAAGCTACAAGGGTAGAGAGGGTTGTTGAAAAACACTACAGGGGAGTAAGGAGAAGGCCATGGGGTAAATATGCAGCAGAAATTAGAGACTCGTCAAAGAAAGGTGCAAGGGTTTGGCTTGGAACGTTTGATACTGCTGAGGAAGCAGCTTTGGCTTATGACAAGGCTGCTTTGAGAATGAGAGGCCCTAAGGCATACCTTAATCATTCAATTGAGATAGTTACAAAGGCTTTAGGACAAGAATATGGCCAAGGAAATGAGCTTTGTTCACCATCATGTAGTTGTGATAACAAGGGATACTCCTACTCACCTTCAGCTTGTGCATGCTGTCCATTCAGACAGGATCCTGTCCGTTCTCGTAAAAGGGTTTCAAGAATTTGGGATGAAAACGTTGACTTTAATTTCAAGCAAGCACCATCAAAGAAAATGGCAACCATGGTCAAGAATGAAAATGATGTACTTGTCTTGCAAGACCTCGGAAATATGCTAAATAACATTGAGAAGAAGAAGGATTAA 1557 0.413 MKAFLDPKLKSIELQHGVSFASAGSGFDDFTANISNVLPVSKQLEYFLHYQIHLRQLVGEDKADSIIKNAIFVVSMGTNDFLQNYYIDPTRPKQFTLEQYENYLVSLMAHYVEVMHKQGGASRLVVVGVAPIGCLPLVKTIMGQNDCVENYNKAAYSFNSKVEAKLAQIRSTLGMKAVLVDIYGILRDAITNPTKYGSTYTHTYIFIETSKRCCGTGTVEYGDSCKGMSICTDPTKMAIHGNFQAESGGILENVWASFVGDDVAGRGKGHAQEFNLNSWEELPNLDCGDEPTKMLERLPSLGRWISMGADEWEELLNTSLSASNREQYSCNDRLADNIIANDMNKKAKATRVERVVEKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRMRGPKAYLNHSIEIVTKALGQEYGQGNELCSPSCSCDNKGYSYSPSACACCPFRQDPVRSRKRVSRIWDENVDFNFKQAPSKKMATMVKNENDVLVLQDLGNMLNNIEKKKD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01925 518 Pfam AP2 domain 359 409 IPR001471 GO:0003700|GO:0006355
Pte2g01925 518 Gene3D SGNH hydrolase 1 241 IPR036514 -
Pte2g01925 518 FunFam Ethylene-responsive transcription factor 2 358 418 - -
Pte2g01925 518 Gene3D AP2/ERF domain 358 419 IPR036955 GO:0003700|GO:0006355
Pte2g01925 518 SMART rav1_2 359 423 IPR001471 GO:0003700|GO:0006355
Pte2g01925 518 SUPERFAMILY DNA-binding domain 359 417 IPR016177 GO:0003677
Pte2g01925 518 PANTHER GDSL ESTERASE/LIPASE EXL3 2 238 - -
Pte2g01925 518 ProSiteProfiles AP2/ERF domain profile. 359 417 IPR001471 GO:0003700|GO:0006355
Pte2g01925 518 Pfam GDSL-like Lipase/Acylhydrolase 13 218 IPR001087 GO:0016788
Pte2g01925 518 CDD AP2 358 415 IPR001471 GO:0003700|GO:0006355
Pte2g01925 518 PRINTS Ethylene responsive element binding protein signature 383 399 IPR001471 GO:0003700|GO:0006355
Pte2g01925 518 PRINTS Ethylene responsive element binding protein signature 360 371 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01925 Pte-Chr2 39547005 39552485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01925 241 479 AP2-EREBP Transcription Factor Family AT4G18450 38.750 1.20e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte2g01925 Lipase_GDSL 1.3e-12 CL0264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01925 - - cave:132171957 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01925 2 39547005 39552485 Pte2g01925 2 39547005 39552485 RCT