Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01918 ATGGAATCATCGTCTGCTTCTAGAGCCGTGTCAGGAGGACGAAGGATGACGAGAGATATTGTGGCATGGAAGGTAATATGGCGTGCGATCCAAGGGCAATCGTGTCCAATTTGTTTCAGAAACCTCGAACGCAGTTACAAAGCAGCTGCGGTTCTCTCGGAGTGTATGCATGCGTACTGCATAGAATGCATTAAAAAATGGAGCAATCTGAGACGAAATTGCCCTATGTGCAATGCTGAATACCGCACTTGGTTCTGCGGACTCAGCTTTTCCTCCAGAACTTTTCGCAAGGAGGTTTTGCCCGCTTTGAACCCCCGAAGTGCTGGTACAATTGGGGACGGTTCGCGTGGTCAAAGAATAGGCAGGGCGGTTGGAAGAGCTAGGGTTGCTTTAAGCAACTCGCGAGCAAGGCCAGTGCCATGGCGGCGATCGTTTGGACTGCCGGGAACTGTGACACCGGATGTTATTGCTCGTAGGAAACTTGAATGGCGTGCCAGTATATATGAGCGAGGATTGCGAGCTGTTCCGTCATCCGTTAGGAGTGATCATGAGCAGAGTATGATAAGAAATAATGGCATTAGGGAGAAAATTCTACAGAGGATTGAACCGTGGATAACAAGGGAGCTACGGGCCATCCTTGGAGATCCTAATCCAAACATCATTGCTCATGTGGCTGCTTCACTCTATGTGCAAAGTGTTAATCAAAAGGCTGAAGTGCTTTCAAGGGAGCTTGAAGTTGAAGATAACTTTCTTGCAACATTGCACCCGTTCCTGCTTGATAAAACCAATATGTTTTGGCATGAACTGAGATGTTTTGCAGAGAGTTCATATAACATAGAAACATTTGATGCAGTGGTTGAATATGAAAATATGAATTAG 879 0.463 MESSSASRAVSGGRRMTRDIVAWKVIWRAIQGQSCPICFRNLERSYKAAAVLSECMHAYCIECIKKWSNLRRNCPMCNAEYRTWFCGLSFSSRTFRKEVLPALNPRSAGTIGDGSRGQRIGRAVGRARVALSNSRARPVPWRRSFGLPGTVTPDVIARRKLEWRASIYERGLRAVPSSVRSDHEQSMIRNNGIREKILQRIEPWITRELRAILGDPNPNIIAHVAASLYVQSVNQKAEVLSRELEVEDNFLATLHPFLLDKTNMFWHELRCFAESSYNIETFDAVVEYENMN* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01918 292 ProSitePatterns Zinc finger RING-type signature. 55 64 IPR017907 -
Pte2g01918 292 SMART ring_2 35 77 IPR001841 -
Pte2g01918 292 Pfam Ring finger domain 34 78 IPR001841 -
Pte2g01918 292 ProSiteProfiles Zinc finger RING-type profile. 35 78 IPR001841 -
Pte2g01918 292 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 26 290 - -
Pte2g01918 292 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 135 IPR013083 -
Pte2g01918 292 SUPERFAMILY RING/U-box 27 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01918 22 269 C3H Transcription Factor Family AT2G39100 45.635 5.11e-72 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01918 - - cave:132168067 324.709