Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01912 ATGTCTTCCGCCATGGATTCTGCAAGGGATGCTGGTGCTGTAGCTGGCACTGTACTAATTCCTGTGCGGTTTGTATGGCCATATGGAGGAAGAAGTGTATATCTTAGTGGGTCTTTCAGAAGGTGGTCCGAGCTTCTGCCAATGTCTCCTGTGGAGGGTTGCCCTACTGTATTCCAAGTCATATACAGTTTGGCGCCTGGGATGCATCAGTACAAGTTTTTTGTTGACGGAGAATGGCGTCATGACGAGCACCAACCTTATGTACCTGGGGAGTATGGGATAGTTAATACAGTCTACTTGACCACTGATGCTAATTATATTCCAGTCATCCAAGATTTAGCTTCTGGTTCTAAAATGGATGTTGATAATGAAACATCTCGGCATGTGGTCCGTCTGACAGATGGAATATTGAGCCAAGTAGCACATAGAATTTCAGATGCTGAGCTGCAGACCTCTCGACGACATATTTCTACTTTCTTGTCTTCACACACTGCCTATGAGTTGCTTCCTGAGTCAGGGAAGATTGTGGCGTTGGATATTGATCTGCCTGTGAAGCAAGCATTTCATATATTGCATGAACAGGGAGTACCTATGGCTCCTCTTTGGGACTTTTGTAAAGGCCAGTTTGTGGGAGTTCTCAGTGCCCTAGATTTTATTTTAATTTTAAGAGAGCTTGGCAATGATGGGTCGAATCTTACTGAAGAAGAGCTGGAAACACATACAATTTCAGCTTGGAAGCATGGAAAAGCATATCTAGACAGACAAATTGCAAATGGAAGAGCTTCAATGAGATTTCTTATCCATGCAGGACCATATGATAATCTGAAAGATATTGCTTTGAAGATCTTGCAAAATGAGGTTTCAACTGTACCTATCATCCATTCAACCTCTGAAGATGGTTCATACCCACAGCTACTACACCTTGCTTCACTGTCTGGAATATTGAAGTGTATCTGCCGGTATTTTAAGCATTGTACTAGTTCGTTGCCCATACTACAACTTCCAATTTCTGCAATTCCTGTGGGTACTTGGGTTCCCAAAATTGGAGACTCAAACGGACGGCCGTTAGCGACTCTGAAACCAAGTTCTTCTCTTAGTTCAGCCTTAAGTTTATTAGTTCAAGCTGGCGTAAGTTCAGTACCAATAGTAGATGATAATGACTCGTTACTTGACATTTATTGTCGAAGTGATATAACAGCTTTGGCCAAGGGCAGAGCCTATACACATATTAATCTTGATGAAATGACTATACATCAGGCACTGCAGCTTGATCAAGACTCGTATTCTAATTATGAGTTGAGGAGTCAAAGATGTCAGATGTGCTTGCGCTCTGATTCACTGCACAAAGTGATGGAGCGGTTGGCAGCCCCTGGTGTCAGGCGTATTGTCATTGTGGAAGCAGGCAGTAAGCGTGTAGAAGGCATTGTTACGCTGAGTGACATTTTCAAGTTCTTCTTCAGTTGGCATTCGATACCAGGGGTTGGGCTTGAAGTAGGATTATGA 1503 0.4305 MSSAMDSARDAGAVAGTVLIPVRFVWPYGGRSVYLSGSFRRWSELLPMSPVEGCPTVFQVIYSLAPGMHQYKFFVDGEWRHDEHQPYVPGEYGIVNTVYLTTDANYIPVIQDLASGSKMDVDNETSRHVVRLTDGILSQVAHRISDAELQTSRRHISTFLSSHTAYELLPESGKIVALDIDLPVKQAFHILHEQGVPMAPLWDFCKGQFVGVLSALDFILILRELGNDGSNLTEEELETHTISAWKHGKAYLDRQIANGRASMRFLIHAGPYDNLKDIALKILQNEVSTVPIIHSTSEDGSYPQLLHLASLSGILKCICRYFKHCTSSLPILQLPISAIPVGTWVPKIGDSNGRPLATLKPSSSLSSALSLLVQAGVSSVPIVDDNDSLLDIYCRSDITALAKGRAYTHINLDEMTIHQALQLDQDSYSNYELRSQRCQMCLRSDSLHKVMERLAAPGVRRIVIVEAGSKRVEGIVTLSDIFKFFFSWHSIPGVGLEVGL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01912 500 SUPERFAMILY CBS-domain pair 354 486 IPR046342 -
Pte2g01912 500 CDD E_set_AMPKbeta_like_N 21 98 - -
Pte2g01912 500 Gene3D Immunoglobulins 20 113 IPR013783 -
Pte2g01912 500 SUPERFAMILY E set domains 20 100 IPR014756 -
Pte2g01912 500 ProSiteProfiles CBS domain profile. 168 229 IPR000644 -
Pte2g01912 500 ProSiteProfiles CBS domain profile. 433 491 IPR000644 -
Pte2g01912 500 ProSiteProfiles CBS domain profile. 352 414 IPR000644 -
Pte2g01912 500 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 148 485 - -
Pte2g01912 500 Pfam Glycogen recognition site of AMP-activated protein kinase 20 101 IPR032640 -
Pte2g01912 500 Gene3D - 144 328 IPR046342 -
Pte2g01912 500 Gene3D - 334 492 IPR046342 -
Pte2g01912 500 SMART cbs_1 355 403 IPR000644 -
Pte2g01912 500 SMART cbs_1 437 486 IPR000644 -
Pte2g01912 500 SMART cbs_1 174 223 IPR000644 -
Pte2g01912 500 Pfam CBS domain 440 485 IPR000644 -
Pte2g01912 500 Pfam CBS domain 354 399 IPR000644 -
Pte2g01912 500 SUPERFAMILY CBS-domain pair 154 324 IPR046342 -
Pte2g01912 500 FunFam Sucrose nonfermenting 4-like protein 17 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01912 Pte-Chr2 39386192 39392097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01912 10 111 Protein tyrosine phosphatase (PTP) family AT3G01510 32.381 1.83e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01912 - - gmx:100785692 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01912 2 39386192 39392097 Pte2g01912 2 39386192 39392097 RCT