Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01884 ATGCAGAACGAAGAAGGACAAATTACTGAGCTCTATATCCCAAGGAAATGCTCTGCCACAAATAGACTGATTACTGCTAAGGATCATGCCTCTGTCCAAATCAACATTGGGCATTTGGATGAAAATGGTCTTTACACAAACCAATTCTCAACATTTGCTCTCTGTGGTTTCATCAGAGCTCAGGGTGATGCTGACAGTGCGTTAGACCGGTTGTGGCAGAAGAAGAAAACCGAGATCCGTCAGTAA 246 0.435 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDENGLYTNQFSTFALCGFIRAQGDADSALDRLWQKKKTEIRQ* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01884 81 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Pte2g01884 81 Gene3D - 1 80 IPR038579 -
Pte2g01884 81 FunFam 40S ribosomal protein S21 1 81 - -
Pte2g01884 81 Pfam Ribosomal protein S21e 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pte2g01884 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pte2g01884 81 PIRSF RPS21e 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01884 Pte-Chr2 38920897 38923067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01884 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 85.185 4.04e-52 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01884 K02971 - qsa:O6P43_021738 159.458