Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01866 ATGGCAGGAGGAAGTGACGGCAATAAGAAGTTTGCGGTTGTGGGGGTGTCTTCTGTTCTTCTGGTAGCAATGTGCGCTGCTGTCGCTATAGGTGTCATCCATAGTACTTCCAAAGATTCTAAAGACGACAGTGGAATTTCAACATCACAAAAATCTGTGCAGAAGCTATGCAACTCCACAGACTACAAGGATACATGTGAGAAGAGTCTTGAACCTGCAGCCAAAAATAGCACAGACCCAAAGGACCTCATAAGGGGTGGTTTCAATTATGCCATGGATGAGCTCAAAGGTGTTCTAAAGAACTCTAGTGTGTTGACTGAAGCGGAGAAGGATCCGAGAACCAAAGAGGCGTATGAAACATGCAAAGAGCTTGTGGAACGCTCCATTGATGAATTCACAGATTCTTTTGACAAGATGGGAAATTTTGATTTGACAAAACTTTCTGAGTACACAGATGACCTCAAGACCTGGCTTACTGCTGCAATGTCTCATCAAGGAGCTTGCTTGGATGCTTTTGAGAATACAACGGGCGATGCCGGTGAGAACATGAAGAAGTTGCTTAAAACCTCACGTGAAATCACAAGCAATGCTCTTGCCATGGTGACTGAGTTCGGTACCTTATCTGGTGATATCAGTAAACAAGTTGCAGGAGCAACCAATGGAAGCAGCAGCGGCCGGAAGCTCCTTTTGATCGACGACGGCTTTCCTTCATGGGTAAATGAGGGTCATCGGAGGCTCCTTCAAGCCACCCCAGGAAACGTTAAGCCTGATGCTGTTGTGGCCATGGATGGCAGTGGGAAATTCAAAACCATTACCGAAGCTCTGAATACAGTTCCAAAGAAGAATACCAAACCCTTTGTAATTTATGTCAAGGCCGGAATTTATCGGGAGCAGGTGCTAGTTGACAAGAAAGTTAACAATGTCATGTTACTCGGTGACGGTCCAACTAAGACGAAGATAACAGGCAACAAGAATTTTATCGATGCTGTGACGGGATTAAACTTCATTGCCAAGAACATTGGATTTGAGAATTCAGCAGGAGCAGCGAAGCACCAAGCAGTGGCCCTGAGGGTAGGGGGCGACCACTCCATCTTCTACAATTGTCAAATGGATGGTTACCAAGACACCCTCTACACCCACTCCCACCGCCAATTCTACCGTGACTGCACCATTAGTGGCACAATCGACTTTGTCTTCGGTGACGCTGAAGCTGTGCTCCAGAACTGCAAGTTGGTTGTGAGGAAGCCAATGGATAATCAACAATGCATTGTGACAGCTCAAGGCAGGGATGACAGGAAAGAGAACTCAGCCATCGTCCTTCAGAATTGCACGATTTCTGGTGATCCGGCTTATATTCCGAATAAGCAGAAGAATAGGGCTTTCCTCGGAAGGCCATGGAAGCCATTATCAAGGACCATCATCATGAATACTCAGATTGATGACATTATTGCACCTGAAGGATGGCTACCATGGCAGGGTGATTTTGGAATCAACACTTGCTTCTATGGTGAGTACAACAATAGAGGACCAGGTTCACCACAGACTAGTAGGGTGAAATGGCCATGCATCCAGAAGATTTCCCCAAATACTGCAAAGAGCTTCACACCTGGAGTTTACATTGGCGGTGATACCTGGATTCCTTCTGCAGGGATTCCATACACTGCTGGCATGATCAATGCTTGA 1683 0.4617 MAGGSDGNKKFAVVGVSSVLLVAMCAAVAIGVIHSTSKDSKDDSGISTSQKSVQKLCNSTDYKDTCEKSLEPAAKNSTDPKDLIRGGFNYAMDELKGVLKNSSVLTEAEKDPRTKEAYETCKELVERSIDEFTDSFDKMGNFDLTKLSEYTDDLKTWLTAAMSHQGACLDAFENTTGDAGENMKKLLKTSREITSNALAMVTEFGTLSGDISKQVAGATNGSSSGRKLLLIDDGFPSWVNEGHRRLLQATPGNVKPDAVVAMDGSGKFKTITEALNTVPKKNTKPFVIYVKAGIYREQVLVDKKVNNVMLLGDGPTKTKITGNKNFIDAVTGLNFIAKNIGFENSAGAAKHQAVALRVGGDHSIFYNCQMDGYQDTLYTHSHRQFYRDCTISGTIDFVFGDAEAVLQNCKLVVRKPMDNQQCIVTAQGRDDRKENSAIVLQNCTISGDPAYIPNKQKNRAFLGRPWKPLSRTIIMNTQIDDIIAPEGWLPWQGDFGINTCFYGEYNNRGPGSPQTSRVKWPCIQKISPNTAKSFTPGVYIGGDTWIPSAGIPYTAGMINA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01866 560 FunFam Pectinesterase 251 557 - -
Pte2g01866 560 Pfam Plant invertase/pectin methylesterase inhibitor 52 200 IPR006501 GO:0004857
Pte2g01866 560 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Pte2g01866 560 SMART PMEI_2 48 200 IPR006501 GO:0004857
Pte2g01866 560 FunFam Pectinesterase 49 205 - -
Pte2g01866 560 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
Pte2g01866 560 NCBIfam pectinesterase inhibitor domain 23 202 IPR006501 GO:0004857
Pte2g01866 560 Pfam Pectinesterase 257 543 IPR000070 GO:0030599|GO:0042545
Pte2g01866 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 204 IPR035513 -
Pte2g01866 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 204 IPR035513 -
Pte2g01866 560 PANTHER PECTINESTERASE 20 547 - -
Pte2g01866 560 CDD PMEI-like_3 56 206 - -
Pte2g01866 560 Gene3D - 251 557 IPR012334 -
Pte2g01866 560 SUPERFAMILY Pectin lyase-like 255 556 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01866 Pte-Chr2 38759419 38761286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01866 5 558 Carbohydrate Esterase AT3G05610 50.088 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01866 K01051 - cave:132167163 679.863