Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01861 ATGAGTAGCTCGAATGGATACAATGGAGTTCCAAGTGAAATACAAAGCCAAAGCAGTGGTGATCCTAGTGATCTTCATGTTTTTGAGGGTGGAAATGTTGCTATTTCGATTCAAGTTCTTCGGCAGGTCACAACTAATTTCAGCGAGGATAACATTTTAGGCAGAGGAGGATTTGGGGTTGTCTACAAAGGGGAATTGCATGATGGAACCAAAATTGCTGTGAAGAGGATGGAATCTGTTGCAGTGGGAACTAAAGGAATGAATGAGTTTCAAGCAGAGATTGCGGTGCTCACTAAAGTAAGGCATAGGCATTTGGTTGCTCTTTTGGGATACTGCATGAATGGAAATGAGAGGCTACTGGTATATGAGTTTATGCCGCAAGGAACGCTGACGCAACATCTATTTGAATGGCGTGAAAATGATCTCACTCCTCTCACTTGGAAGCAAAGGGTTTCAATAGCTTTAGATGTTGCAAGAGGTGTGGAATATCTTCATAGCTTAGCGCAGCAAAGCTTCATACACAGAGATCTAAAACCCTCAAACATACTATTAGGAGATGATATGAGGGCCAAGGTAGCTGATTTTGGTTTAGTTAAAAATGCTCCCGACGGGAAATATTCGGTGGAGACAAGGTTGGCTGGGACATTTGGATATCTTGCACCTGAGTATGCAGCTACTGGAAGAGTCACAACCAAGGTGGATGTTTATGCATTTGGTGTTATTTTGATGGAACTGATTACTGGGCGGAGGGCACTGGATGATACCGTGCCGGATGATAGGACTCATTTAGTTACATGGTTCCGCAGAGTCCTCATCAACAAGGACAACATTCCAAAAATTATTGACCAAGCCCTCGACCCTGACGAGGAAACCATAGAGAGCATAAACAAAGTGGCTGAGCTAGCAGGACATTGCACAGCCCGTGAGCCATACCAGAGACCAGATATGGGACATGCAGTCAATGTTTTGGTCCCTCTTGTGGAACAATGGAAACCCACACGCCAAGAAGATGAAGATAGTTACGGTATTGATTTACATATGACCCTTCCTCAAGCTTTGCAAAGATGGCAGGCTAATGAGGGCACTTCAACAATGTTTGGAGGCATGTCCTTCTCACAAACACAATCAAGCATCCCCTCAAAACCGTCTGGATTTGCAGATTCCTTTGATTCCATGGACTGTCGGTGA 1188 0.4419 MSSSNGYNGVPSEIQSQSSGDPSDLHVFEGGNVAISIQVLRQVTTNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAVGTKGMNEFQAEIAVLTKVRHRHLVALLGYCMNGNERLLVYEFMPQGTLTQHLFEWRENDLTPLTWKQRVSIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVILMELITGRRALDDTVPDDRTHLVTWFRRVLINKDNIPKIIDQALDPDEETIESINKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTRQEDEDSYGIDLHMTLPQALQRWQANEGTSTMFGGMSFSQTQSSIPSKPSGFADSFDSMDCR* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01861 395 FunFam receptor protein kinase TMK1 9 124 - -
Pte2g01861 395 Gene3D Transferase(Phosphotransferase) domain 1 125 348 - -
Pte2g01861 395 CDD STKc_IRAK 53 326 - -
Pte2g01861 395 SUPERFAMILY Protein kinase-like (PK-like) 22 332 IPR011009 -
Pte2g01861 395 SMART serkin_6 47 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01861 395 MobiDBLite consensus disorder prediction 370 384 - -
Pte2g01861 395 Gene3D Phosphorylase Kinase; domain 1 10 124 - -
Pte2g01861 395 MobiDBLite consensus disorder prediction 370 395 - -
Pte2g01861 395 PANTHER OSJNBA0070M12.3 PROTEIN 9 395 - -
Pte2g01861 395 ProSiteProfiles Protein kinase domain profile. 47 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01861 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Pte2g01861 395 MobiDBLite consensus disorder prediction 1 22 - -
Pte2g01861 395 Pfam Protein tyrosine and serine/threonine kinase 50 321 IPR001245 GO:0004672|GO:0006468
Pte2g01861 395 FunFam receptor protein kinase TMK1 125 342 - -
Pte2g01861 395 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01861 Pte-Chr2 38670106 38673896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01861 35 323 Receptor kinase-like Gene Family AT4G02010 46.309 2.26e-80 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pte2g01861 PK_Tyr_Ser-Thr 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01861 K00924 - qsu:112030135 717.613