Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01857 ATGGCTTCCGATTCGTCTTCTGAAGGAGTGCCACTTGCATCGAAGAGTAGTAAGATGAGTTTGGAAGAAAAGAGAGGACTTGTCTATGAAATATCAAAATGGCCCCATGGTGCATCTGAAGTGTTACGGGCATGGAGTCGTCAAGAGATTTTGCAGATATTGTGTGCAGAGTTGGGGAAGGAAAGGAAATACACCGGCTTGACAAAGGTAAAAATTATAGAAAACCTCCTGAAAATTGTTGCTGAGAAGAAAGGAGGGAGCCTCGATGCTGCTGCTGAACTCGAACCTGCTTCTTCTCCTACACTTGGGCAAAAAAGTACTAAGAGGCAGAGGAAAACTGAGAATCCATCTCGCTTACCTGTCCCTGTGAACAATCTCTCTATCAATAGCGGTGGTTCTGATCTAGGTAATATTGTATACTGCAGAAACTCGGCTTGTAAAGCTACCTTAAGTGGAGAAGATACATTTTGCAAGAGGTGTTCCTGTTGTATCTGTTATAAGTATGATGACAACAAAGATCCTAGCTTATGGTTAATATGCAGCTCTGAGCCTCCATTTCTCGGTGATTCTTGTGGTCTATCATGCCATCTTGAGTGTGCTTTGACTAATGGAAGTTCTGGCATTATGAAGGATGGACGACATTCCAAGCTGGATGGGAGCTTCTACTGTGTCTCCTGTGGAAAAGTGAATGATTTGCTTGGATGCTGGAGAAAACAACTTATGATAGCAAAGGATACCAGACGTGTTGACATACTGTGCTATCGGCTATCCTTGAGCCAGAAGCTTCTACAAGGGACTGTGAAGTATCTGAAGCTTCTTGAAATAGTGGACGAAGCTGTAAATAAACTTGAACCTGAAGTTGGCCCATTAACAGGTTTGCCGGTCAAGATGGGCAGGGGTATTGTGAACAGACTTTCGTGTGGACCAGAAGTTCAGAAACTCTGTGCTTTTGCTGTAGAATCACTGGATTTATTCATTGATGACAATATATTGTATCCATCCCTTAGCTCAAGCAGTCAAGGGTTGATGTCATCTGATATAGTGAGTTTCGAAGATGTGAGTGCAACATCGCTTACTGTGACACTAGCTACTCAAGACAAACCTGCTGGAAACATTATTGGTTACAACTTATGGCATCGTAAGGCTCTTGATGTGGATTACCCGATACAACCAACTTGCACATTGTTCTTACCAAATACAAAGTTTACTATCAGAGGCTTATCCCCAGCTACAGAGTATGTGTTTAAATTTGTTTGCTTTAATGAGACAATGGAATTGGGCGCATGTGACCTTTCTTTCTCAACTCTGAATGCTGAAGATGAAGTCCCTAATTGCTCGACAATAGACAGAAGTGAGAGCCCAGCAACCAACTGCAGTAGCCTTTCCAATCCTTCTTCTGTTGAAGATGAAACTAATAACTGTAATCCCTACATCAACCAGACCAATAATGCTAACCTGAGGGTTGCTTCGGCAATTCTATCTAATGGCACTGCTAACTGCACTCACAAGAGCAATGGAGGACTAGCAGGAGATGCTGATTCTTTGTCAGGCAAGGATCATAGCAGTCTCTTTGTTAGCCCTGTGCCTGATTCTGATGTGCTGCAACTTGAAAAGAAACACACATCAGAGGATCTTAATATCATTGACGACATGAGTATTGATGGTGGTTTGAATTCTCCTGTCCTGAACGGAAAAGATCGTGTGCCACTCGTGCCGAGTCGCTCAGAGGCTGGTTTGCCTATTACCCCTTGCCGGATGGAAGTAGTTAAGGATGGTGTTGGAAGGAGTGGCAGATCTAAATCTTGCAGCAAAGACCAAGAAAATGGCAGCGGAAAGAGAGAGAGACCTCAAGATGGCTGTACATCAAGAAAGAGAAGTGGGGATGGACAGGATAAGGATTCTGAAGCCAATAACAGTACAGATTTGGATTTTGAAAATAATGTCAAGGTGATTAGACAGCTAGAGTGTGATGGACACATAGAGAAAAAATTTAGGCAGAAATTCTTGACTTGGTACAGTTTGAGAGCAACAGCCCAGGAAGTGAAGGTTGTCAAAGTTTTCATTGACACATTCATGGAAGACCCTGCAGCTCTTGCAGAGCAGCTTATGGACACCTTTTCTGAATGTGCATCAAGCAAAAGAATCTCCGTAGTACCGGCTGGCTTCTGCATGAAGCTTTGGCATTGA 2187 0.4312 MASDSSSEGVPLASKSSKMSLEEKRGLVYEISKWPHGASEVLRAWSRQEILQILCAELGKERKYTGLTKVKIIENLLKIVAEKKGGSLDAAAELEPASSPTLGQKSTKRQRKTENPSRLPVPVNNLSINSGGSDLGNIVYCRNSACKATLSGEDTFCKRCSCCICYKYDDNKDPSLWLICSSEPPFLGDSCGLSCHLECALTNGSSGIMKDGRHSKLDGSFYCVSCGKVNDLLGCWRKQLMIAKDTRRVDILCYRLSLSQKLLQGTVKYLKLLEIVDEAVNKLEPEVGPLTGLPVKMGRGIVNRLSCGPEVQKLCAFAVESLDLFIDDNILYPSLSSSSQGLMSSDIVSFEDVSATSLTVTLATQDKPAGNIIGYNLWHRKALDVDYPIQPTCTLFLPNTKFTIRGLSPATEYVFKFVCFNETMELGACDLSFSTLNAEDEVPNCSTIDRSESPATNCSSLSNPSSVEDETNNCNPYINQTNNANLRVASAILSNGTANCTHKSNGGLAGDADSLSGKDHSSLFVSPVPDSDVLQLEKKHTSEDLNIIDDMSIDGGLNSPVLNGKDRVPLVPSRSEAGLPITPCRMEVVKDGVGRSGRSKSCSKDQENGSGKRERPQDGCTSRKRSGDGQDKDSEANNSTDLDFENNVKVIRQLECDGHIEKKFRQKFLTWYSLRATAQEVKVVKVFIDTFMEDPAALAEQLMDTFSECASSKRISVVPAGFCMKLWH* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01857 728 MobiDBLite consensus disorder prediction 592 639 - -
Pte2g01857 728 MobiDBLite consensus disorder prediction 592 640 - -
Pte2g01857 728 CDD FN3 348 422 IPR003961 GO:0005515
Pte2g01857 728 MobiDBLite consensus disorder prediction 451 470 - -
Pte2g01857 728 PANTHER VIN3-LIKE PROTEIN 2-RELATED 14 728 IPR044514 GO:0010048|GO:0040029
Pte2g01857 728 SUPERFAMILY Fibronectin type III 348 423 IPR036116 GO:0005515
Pte2g01857 728 Gene3D Immunoglobulins 345 456 IPR013783 -
Pte2g01857 728 MobiDBLite consensus disorder prediction 92 123 - -
Pte2g01857 728 CDD PHD_VIN3_plant 161 226 - -
Pte2g01857 728 ProSiteProfiles Fibronectin type-III domain profile. 343 441 IPR003961 GO:0005515
Pte2g01857 728 Pfam Fibronectin type III domain 348 421 IPR003961 GO:0005515
Pte2g01857 728 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01857 Pte-Chr2 38645722 38650366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01857 13 595 PHD Gene Family AT4G30200 48.792 4.96e-170 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01857 - - qsa:O6P43_002848 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01857 2 38645722 38650366 Pte2g01857 2 38645722 38650366 RCT