Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01855 ATGAAGTACATACGCACCAGCAGCTTGAAGAGGCTATTCTCACTCAAAAGACGAAGTTTTAGTGAAGACCCGTTGAGCTCAGCTGTCTCTACTGGCGATGAAAACGATGAAAGCTTAAATATTCTTCAATTGACAGAGTGTCCTCAGAGACCCACTTGGAAATGCTTCTCGTATGAAGAAATATTTGAAGCTACCAATGGATTTGACTCAGAGAATTTGGTCGGAAAAGGTGGCTATGCTGAGGTTTACAGGGGAACTCTTGAAAATGGCGAAGCCATAGCTGTGAAAAGGTTGACCAAAACTTCATCTGATGAGCGAAAAGGGAAAGAGTTTTTGACAGAGATTGGTACAATTGGTCATGTTCATCATCCTAATGTGTCTTCTCTGCTTGGCTGTTGCATTGACAATGGTCTTTACCTGGTCTTTCAATTCTCCTCCAAAGGCTCTGTGACATCTCTTCTTCATGATTTAAATCTGCCACCACTGGAATGGAAAACAAGACACAAGATAGCTATTGGGACAGCACGTGGCTTACACTACTTGCATAAAGGCTGCCAGAGAAGGATTATTCATAGGGACATCAAGGCTTCAAATATTTTGTTGACTGATGATTTTGAACCCCAGATATCAGATTTTGGATTGGCCAAATGGCTTCCTTCTCAATGGACTCATCATTCAATTGCTCCGATTGAAGGGACATTTGGGCATCTAGCTCCTGAGTACTACATGCATGGCATAGTGGATGAGAAAACAGATGTGTTTGCTTTCGGTGTGTTTTTGTTGGAGCTCATCTCTGGAAGAAAGCCTGTTGATGGGACATACCAAAGCTTACACAACTGGGCTAAACCAATATTAAACGAAGGAAACATTGAGAAGCTGGTAGATCCTACACTTGAAGGTGCTTATGATGTTACACAGTTGAAGAGACTTGCCTTTGCAGCCTCTCTATGCATTAGGGCATCCTCAACTTGGAGACCAACCATGAACGAGGTATTGCAAGCAATGGAAGAAGAAGTGGATAGAGAGAGATGGAAAATGCCAGAGGAAGAAGAAGAAGATCAAGAAGAATTCTGGGGTTTTGAGGATCTTGATTATGACGACCATGACAGCTCCTTCACATTCTCGCTTCATGACTCTGCTAGCAGTTCTTAG 1152 0.4253 MKYIRTSSLKRLFSLKRRSFSEDPLSSAVSTGDENDESLNILQLTECPQRPTWKCFSYEEIFEATNGFDSENLVGKGGYAEVYRGTLENGEAIAVKRLTKTSSDERKGKEFLTEIGTIGHVHHPNVSSLLGCCIDNGLYLVFQFSSKGSVTSLLHDLNLPPLEWKTRHKIAIGTARGLHYLHKGCQRRIIHRDIKASNILLTDDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYMHGIVDEKTDVFAFGVFLLELISGRKPVDGTYQSLHNWAKPILNEGNIEKLVDPTLEGAYDVTQLKRLAFAASLCIRASSTWRPTMNEVLQAMEEEVDRERWKMPEEEEEDQEEFWGFEDLDYDDHDSSFTFSLHDSASSS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01855 383 Pfam Protein tyrosine and serine/threonine kinase 72 282 IPR001245 GO:0004672|GO:0006468
Pte2g01855 383 FunFam Putative receptor-like serine/threonine-protein kinase 146 359 - -
Pte2g01855 383 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Pte2g01855 383 ProSiteProfiles Protein kinase domain profile. 68 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01855 383 SMART serkin_6 68 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g01855 383 Coils Coil 332 352 - -
Pte2g01855 383 SUPERFAMILY Protein kinase-like (PK-like) 51 339 IPR011009 -
Pte2g01855 383 FunFam Putative receptor-like serine/threonine-protein kinase 35 144 - -
Pte2g01855 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Pte2g01855 383 Gene3D Transferase(Phosphotransferase) domain 1 146 362 - -
Pte2g01855 383 PANTHER OS08G0249100 PROTEIN 36 369 IPR046958 -
Pte2g01855 383 Gene3D Phosphorylase Kinase; domain 1 42 144 - -
Pte2g01855 383 CDD STKc_IRAK 74 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01855 Pte-Chr2 38625713 38628400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01855 56 340 Trihelix Transcription Factor Family AT1G70460 44.746 6.01e-74 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte2g01855 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01855 - - qsa:O6P43_002844 640.188