Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01832 ATGTCGTCTTGTCTGAGTGGAGGTGGTGGAAGAACCTATAGATTCGAATTCGAATTTGCGAAAGCCACGTCCACCTCAACTAGAACATCCCAATCGTCATCTTCACCTTCTTCAACTATATCTGAATCAAGCCTTTCCCCACTAGCAATCTCAACTCGAAAAGCTCGGACTCCACGAAAACGTCCCAACCAAATTTACAACGAAGCTGCTGCGCTTCTCTCCACAGCTTACCCAAAAATCTTCCCAACCAAAGGTCTCACAACAAAACCCCGCAAATTCACAAAACCCACAGACACTTTCTTCTTGGACGAGTCCTCTGAGTTGCTGTTACCATTCAGAGTCTTTGAGAGCTCTGAATTCCTCCTTCACCAACCAATTCAAGAGAAACCCAATTTCCAAATGGACTCAAAGGTCGTAAATTTACCTTTAAAACAATGCCATAGTCCTGGGGAAATCATTTCAGGGGTGAATTCGTTGGAATTAGGTAACGACTGCGAAGAAGACTTCGATGCTGAGTCAATCCTTGATGAAGAAATTGAAGAAGGCATTGATAGCATAATGGGAAACAGAGCTGATGACGATTCAAATAGAGCTTCTTGTGAAATCAACGCATCATGGTATGGAAACACGGTAATGGGGTTTGGTCTTGGAAGGAAATTCGATTATGGGTTCGGGTTCAGACGAAGTGGAATGGGCGCTCTCAGACATGTTGATGATGGGAATTGGTGGAGTTTCCCGACAGTGGATATGCGTCAAATCTCACCCAAGCTGGACAAGTCTTCACCTTTGGCATCTGCAGAGAAAAAGAAGAAGAAACAGAAGAAAGTGGGAAAGTCAAAGCCAGCAAATATTGAATCCAAGAGCAAAGATAAAATGGCTGAATTGGACTTGGAGTTGTCAAAACAAAACTCCAAATCCTCGGGCTTACAATTGAAATTGGATTATGACGGGGTTTTGAAAGCTTGGTGCGGTCGAGGTTCACCATTTTCTGATGAATCCATCGGCTCTCAAGCACAAGGAAACGATATCACCTCTCGGTTGCCGGAAATTGATCTGTTTTTGGACAGTGGGGGCGTGAGAGAAGCTAGCGTGATGCGCTACAAGGAAAAGCGGCGTACGCGCCTCTTCTCTAAGAAGATTAGATATCAAGTCAGAAAAGTCAACGCAGATCTACGGCCTAGAATGAAGGGGCGATTTGTGAGGAGGTCCAACCCTAACACATGCTCAAAGAGGAGTGCCAAACAAGGAACGGCAAAAGCAAAAGAGCCTTCTCTTCGACACATTCTCTCGTTTCATTAA 1299 0.4457 MSSCLSGGGGRTYRFEFEFAKATSTSTRTSQSSSSPSSTISESSLSPLAISTRKARTPRKRPNQIYNEAAALLSTAYPKIFPTKGLTTKPRKFTKPTDTFFLDESSELLLPFRVFESSEFLLHQPIQEKPNFQMDSKVVNLPLKQCHSPGEIISGVNSLELGNDCEEDFDAESILDEEIEEGIDSIMGNRADDDSNRASCEINASWYGNTVMGFGLGRKFDYGFGFRRSGMGALRHVDDGNWWSFPTVDMRQISPKLDKSSPLASAEKKKKKQKKVGKSKPANIESKSKDKMAELDLELSKQNSKSSGLQLKLDYDGVLKAWCGRGSPFSDESIGSQAQGNDITSRLPEIDLFLDSGGVREASVMRYKEKRRTRLFSKKIRYQVRKVNADLRPRMKGRFVRRSNPNTCSKRSAKQGTAKAKEPSLRHILSFH* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01832 432 ProSiteProfiles CCT domain profile. 360 402 IPR010402 GO:0005515
Pte2g01832 432 MobiDBLite consensus disorder prediction 400 432 - -
Pte2g01832 432 MobiDBLite consensus disorder prediction 23 63 - -
Pte2g01832 432 MobiDBLite consensus disorder prediction 254 287 - -
Pte2g01832 432 Pfam CCT motif 360 402 IPR010402 GO:0005515
Pte2g01832 432 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 405 - -
Pte2g01832 432 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01832 Pte-Chr2 38414493 38418844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01832 301 404 C2C2-CO-like Transcription Factor Family AT1G68520 45.455 3.52e-22 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte2g01832 CCT 1.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01832 - - qsa:O6P43_022368 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01832 2 38414493 38418844 Pte2g01832 2 38414493 38418844 RCT