Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01816 ATGAGTAACGGCAATTGGCGAAACCATGACATTGAAGCCGGACGCGGTCGTTCTGGCGACCATGGCGACGAGGAGTCTTCGCCAGACCCATTCGATATTACCAGCACCAAGAATGCTTCACTTGAACGTCTCAAGCGGTGGAGACAAGCAGCACTTGTGTTAAATGCATCCCGACGATTCCGGTACACTTTGGACTTGAAGAAAGAAGAAGAGAAGAGGCAAATACTTAGGAAAATCCGAGCACATGCACAGGCCATTCGGGCTGCGTATCTTTTCAAAGCAGCTGGGGAGCAAGTAAATGGTACTGTGACCACAACTTCAACTCCTACTACTGAGTTTCCCATTGGACAAGAGCAACTGGCTTCCATTTCAAGGGATCATAACATGTCTGCCCTGCAGCAACATGGAGGGGTTAAAGGGCTTGCAGATTTGTTGAAAACAAATTTGGAGAAGGGTATTACTGGTCATGATGCTGATGTAGCTAAGCGTAGAAATGCATTTGGGTTAAACAATTTTCCTCGTAAGAAAGGGAGGAGTTTTCTTATGTTTGTGTGGGATGCTTGTAAAGATCTCACTCTAATCATATTGATGGTTGCTGCTGTGGCATCATTGGCACTTGGAATAAAAACAGAGGGCATCAAGGAAGGATGGTATGATGGGGCAAGCATTGCTTTTGCAGTTATCCTTGTCATTGCTGTAACTGCAATAAGTGACTATAAGCAATCTCTTCAGTTTCGAAATCTTAATGAGGAGAAGAGAAATATACATTTAGAGGTTATAAGAGCTGGTAGAAGAGTTGAGATCTCAATATATGATATTGTTGTTGGTGATGTTCTGCCCCTCAACATTGGTGATCAGGTCCCTGCTGATGGAATTCTAGTTTCTGGTCATTCTCTGGCAATTGATGAATCAAGTATGACTGGAGAGAGCAAGATTGTTCATAAGGATTCTAAGGATCCATTTTTGATGTCTGGTTGCAAAGTTGCAGATGGCAATGGTATCATGCTGGTAACCAGTGTTGGGGTTAACACTGAATGGGGACTTTTAATGGCGAGTATTTCTGAAGACACTGGAGAAGAAACACCCCTGCAGGTACGACTAAATGGTGTTGCAACCTTCATTGGCATCGTTGGACTGACAGTAGCTTTTGTCGTCCTTGTTGTCCTTTTTGTTAGATATTTCACTGGGCATACTAAAAATCCAGATGGAAGTCGTCAGTTTACTGCAGGTCAAACAAAAGTTGGTCATGCCATTGATGGGGCCATTAAGATCATCACAGTTGCGGTTACAATTGTTGTAGTTGCTGTACCTGAAGGACTCCCCTTGGCCGTTACCTTAACGCTTGCCTATTCAATGAGGAAAATGATGGCAGATAAGGCTTTGGTGAGGAGGTTATCTGCCTGTGAAACAATGGGGTCTGCTACTACCATTTGCAGCGATAAGACTGGAACATTGACATTGAATCAGATGACCGTGGTTGAAGCTTACATTGGAGGGAAGAAAATTGACCCTCCCCACAACAAGTCTGAGGTCTCTCCTTCAGTCTTGCCAATTATTATTGAGGGCATTGCACAGAACACTACTGGTAGCGTTTATTTACTTGAGGGTGGTGGAGATGTGGAGATTTCTGGATCACCAACAGAAAAGGCAATTCTACAGTGGGGAGTCAAACTTGGGATGGACTTTGAGGCTGTTAGATCTGAATCCTCCATTCTCCATGTCTTCCCCTTCAACTCTGATAAGAAAAGAGGAGGTGCTGCGGTGAAGACGTCCAATTCGCAAGTTCATTTACACTGGAAAGGTGCTGCGGAGATAGTTTTGGCCTCGTGCACTCAACATGTTGATTTGGATGGTCAATTGGTGGCGATGGATGAAGAAAAGGTTATGTTCTTCAAGAAAGCTATTGAAGATATGGCTGCAAGTAGTTTGAGATGCGTTGCCATTGCATATAGGCCATACGAGGTGGAAAAGGTCCCCACCAATGAGGAGCAATTGGCGCAGTGGGCCTTGCCTGAAGATGATCTCATCTTACTGGCTATTGTTGGCATAAAGGACCCTTGCAGACCTAGTGTCAAAGATGCAGTCCGACTCTGCCAAAATGCTGGTGTCAAGGTAAGAATGGTCACAGGTGACAATGTTAAGACTGCAAAAGCTATCGCTTTGGAATGTGGAATACTTGGATCTGATGAAGATGCTAATGAGCCAAATCTCATTGAAGGAAAAGCTTTTCGTGCTTTATCTGACGTAGAAAGAGAAGAAATTGCTGAAAAGATATCAGTTATGGGACGGTCCTCTCCCAATGATAAACTTTTGCTTGTGCAAGCATTGAGAAGAAAGGGACATGTTGTTGCTGTAACAGGCGATGGCACTAATGATGCTCCTGCACTCCATGAGGCGGACATTGGTCTTGCCATGGGCATTCAAGGGACAGAAGTTGCCAAAGAGAGCTCTGATATTATAATCCTGGATGACAATTTTGCTTCGGTTGTGAAGGTTGTCAGATGGGGAAGATCTGTATATGCAAATATCCAGAAATTTATCCAATTCCAGCTTACTGTAAATGTTGCAGCTCTTATTATAAATGTTGTTGCTGCAATTTCCTCTGGTGATGTCCCACTGAATGCAGTGCAGCTGCTCTGGGTGAATTTGATCATGGATACTCTTGGAGCACTGGCACTTGCAACTGAACCACCAACTGATCACCTCATGCACAGGCCCCCAGTGGGACGAAGAGAACCTCTCATTACAAACATCATGTGGCGTAATTTGTTGATACAGGCAATGTATCAAGTGAGTGTCTTACTTGTTCTCAATTTCCGGGGCAAGAGTTTGCTACATCTGAAACACGACGGCGGTGTCCATGCTATCAAAGTCAAGAACACAGTAATATTCAATGCATTTGTCCTTTGCCAGATATTCAATGAGTTCAACGCAAGGAAACCAGATCAACTCAACATATTCAAAGGAGTTACTAAAAATTTACTCTTCATGGGGATAGTGGGATTGACTTTAGTACTCCAGATTATCATCATTGAGTTTGTAGGCAAGTTCACTTCAACTGTCAGGCTTAATTGGAAGCAATGGATCGTCTGCGTCGTTATTGGATTCATCAGCTGGCCCCTAGCTTTGGTTGGGAAGTTGATACCTGTACCATCAACACAGTGCAGTCAGTTTTTCAGTCGAATGTTCACAAGGCATCGGCGAAGAACTACAAGTAAGAATCTTGAGAATTGTTTCTTGAAATTTTTTCACATGCAGCGGCAATTACAGCTTTTGTTTCCACGTGTTTGGTTTTGTACTTCCCAGGTTAGTGTGTCGAGATGTAGTTAA 3330 0.436 MSNGNWRNHDIEAGRGRSGDHGDEESSPDPFDITSTKNASLERLKRWRQAALVLNASRRFRYTLDLKKEEEKRQILRKIRAHAQAIRAAYLFKAAGEQVNGTVTTTSTPTTEFPIGQEQLASISRDHNMSALQQHGGVKGLADLLKTNLEKGITGHDADVAKRRNAFGLNNFPRKKGRSFLMFVWDACKDLTLIILMVAAVASLALGIKTEGIKEGWYDGASIAFAVILVIAVTAISDYKQSLQFRNLNEEKRNIHLEVIRAGRRVEISIYDIVVGDVLPLNIGDQVPADGILVSGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGNGIMLVTSVGVNTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAFVVLVVLFVRYFTGHTKNPDGSRQFTAGQTKVGHAIDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYIGGKKIDPPHNKSEVSPSVLPIIIEGIAQNTTGSVYLLEGGGDVEISGSPTEKAILQWGVKLGMDFEAVRSESSILHVFPFNSDKKRGGAAVKTSNSQVHLHWKGAAEIVLASCTQHVDLDGQLVAMDEEKVMFFKKAIEDMAASSLRCVAIAYRPYEVEKVPTNEEQLAQWALPEDDLILLAIVGIKDPCRPSVKDAVRLCQNAGVKVRMVTGDNVKTAKAIALECGILGSDEDANEPNLIEGKAFRALSDVEREEIAEKISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGKSLLHLKHDGGVHAIKVKNTVIFNAFVLCQIFNEFNARKPDQLNIFKGVTKNLLFMGIVGLTLVLQIIIIEFVGKFTSTVRLNWKQWIVCVVIGFISWPLALVGKLIPVPSTQCSQFFSRMFTRHRRRTTSKNLENCFLKFFHMQRQLQLLFPRVWFCTSQVSVSRCS* 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01816 1109 SMART Cation_ATPase_N_a_2 134 208 IPR004014 -
Pte2g01816 1109 FunFam Calcium-transporting ATPase 39 95 - -
Pte2g01816 1109 SFLD Haloacid Dehalogenase 460 838 - -
Pte2g01816 1109 PANTHER CATION TRANSPORTING ATPASE 106 1051 - -
Pte2g01816 1109 FunFam Calcium-transporting ATPase 678 831 - -
Pte2g01816 1109 FunFam Calcium-transporting ATPase 488 686 - -
Pte2g01816 1109 Gene3D - 157 354 - -
Pte2g01816 1109 PRINTS Sodium/potassium-transporting ATPase signature 471 492 - -
Pte2g01816 1109 PRINTS Sodium/potassium-transporting ATPase signature 597 615 - -
Pte2g01816 1109 PRINTS Sodium/potassium-transporting ATPase signature 221 241 - -
Pte2g01816 1109 Pfam E1-E2 ATPase 256 456 - -
Pte2g01816 1109 SUPERFAMILY HAD-like 476 891 IPR036412 -
Pte2g01816 1109 Gene3D - 39 94 - -
Pte2g01816 1109 Gene3D - 475 831 IPR023214 -
Pte2g01816 1109 ProSitePatterns E1-E2 ATPases phosphorylation site. 480 486 IPR018303 -
Pte2g01816 1109 Pfam haloacid dehalogenase-like hydrolase 475 800 - -
Pte2g01816 1109 Gene3D - 488 686 IPR023299 GO:0000166
Pte2g01816 1109 MobiDBLite consensus disorder prediction 10 30 - -
Pte2g01816 1109 SFLD p-type atpase 460 838 IPR044492 -
Pte2g01816 1109 CDD P-type_ATPase_Ca_PMCA-like 160 919 - -
Pte2g01816 1109 PRINTS P-type cation-transporting ATPase superfamily signature 701 711 - -
Pte2g01816 1109 PRINTS P-type cation-transporting ATPase superfamily signature 302 316 - -
Pte2g01816 1109 PRINTS P-type cation-transporting ATPase superfamily signature 478 492 - -
Pte2g01816 1109 PRINTS P-type cation-transporting ATPase superfamily signature 810 822 - -
Pte2g01816 1109 PRINTS P-type cation-transporting ATPase superfamily signature 786 805 - -
Pte2g01816 1109 PRINTS P-type cation-transporting ATPase superfamily signature 679 690 - -
Pte2g01816 1109 Pfam Ca2+-ATPase N terminal autoinhibitory domain 29 71 IPR024750 GO:0005516
Pte2g01816 1109 FunFam Calcium-transporting ATPase 9 plasma membrane-type 332 502 - -
Pte2g01816 1109 Pfam Cation transporting ATPase, C-terminus 871 1048 IPR006068 -
Pte2g01816 1109 SUPERFAMILY Calcium ATPase, transmembrane domain M 135 1049 IPR023298 -
Pte2g01816 1109 NCBIfam calcium-translocating P-type ATPase, PMCA-type 109 1050 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pte2g01816 1109 Pfam Cation transporter/ATPase, N-terminus 135 203 IPR004014 -
Pte2g01816 1109 NCBIfam HAD-IC family P-type ATPase 223 392 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01816 1109 NCBIfam HAD-IC family P-type ATPase 418 501 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01816 1109 NCBIfam HAD-IC family P-type ATPase 753 866 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01816 1109 FunFam Calcium-transporting ATPase 233 354 - -
Pte2g01816 1109 SUPERFAMILY Calcium ATPase, transduction domain A 256 351 IPR008250 -
Pte2g01816 1109 FunFam Calcium-transporting ATPase 186 243 - -
Pte2g01816 1109 FunFam Calcium-transporting ATPase 803 1052 - -
Pte2g01816 1109 Gene3D - 186 1039 - -
Pte2g01816 1109 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 485 683 IPR023299 GO:0000166
Pte2g01816 1109 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01816 Pte-Chr2 38236199 38248297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01816 2 1057 Primary Pumps ATPases AT5G57110 75.543 0.0 1612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01816 K01537 - qsa:O6P43_002790 1718.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01816 2 38236199 38248297 Pte2g01816 2 38236199 38248297 RCT