Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01805 ATGGAATATGAGAAAGCATGCAACACAGCGCTTACTCTTGATCTGGGATTGGCAAGCTATGCTCAAAGCAAGGAGAAGCAGAAGACAAATAAGCCATTGGTGTGCTTCGACATGTCCTTTGAGCTTCTTCCTAAACATGAAGTCGATAACGTGGATTCGAAGGCAGAAAATGATCAATCAAGTTTGAAGAGAAGAAGCAGTAGTAGTGATCCTGAAAAGCATCACCACATACATCATATCAACAGCAGCACTAAGAACGGCTGCAGAAAGAAATTGAGGCTGACAAAAGAACAGTCAACTTCGCTGGAAGAGAGCTTTAAGCTGCATACCACTCTCAATACGATTCAGAAACAGTCACTAGCTGAGAAATTGAATCTAAGGCCCAGACAAGTGGAAGTCTGGTTTCAGAACAGGAGAGCAAGGACCAAGTTCAAGCAAACTGAGGTAGATTTTGAGCTCTTGAAGAAATGGTGCGAAAAACTGAGTGATGAGAATAGAAGGTTGAAGAAAGAATTACAAGAACTACATGCACTAAAAGTTGGACCATCATCATTATACATTCAACTCCCAAAGGCTACTACGCCAAGAATGTGTTCCTCATGTGACAAGCTTGTCAATGCTGACATTGAAGGGAACACTAATGACGGAAGCATTGTTGCAGTTTCGAATGTGGTCCGAACCGAGAATAATTAG 693 0.4185 MEYEKACNTALTLDLGLASYAQSKEKQKTNKPLVCFDMSFELLPKHEVDNVDSKAENDQSSLKRRSSSSDPEKHHHIHHINSSTKNGCRKKLRLTKEQSTSLEESFKLHTTLNTIQKQSLAEKLNLRPRQVEVWFQNRRARTKFKQTEVDFELLKKWCEKLSDENRRLKKELQELHALKVGPSSLYIQLPKATTPRMCSSCDKLVNADIEGNTNDGSIVAVSNVVRTENN* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01805 230 CDD homeodomain 89 143 IPR001356 GO:0003677
Pte2g01805 230 Pfam Homeobox associated leucine zipper 145 178 IPR003106 GO:0006355|GO:0043565
Pte2g01805 230 Pfam Homeodomain 89 143 IPR001356 GO:0003677
Pte2g01805 230 Gene3D - 93 143 - -
Pte2g01805 230 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Pte2g01805 230 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 12 210 - -
Pte2g01805 230 SMART halz 145 188 IPR003106 GO:0006355|GO:0043565
Pte2g01805 230 MobiDBLite consensus disorder prediction 49 77 - -
Pte2g01805 230 Coils Coil 154 178 - -
Pte2g01805 230 SUPERFAMILY Homeodomain-like 70 146 IPR009057 -
Pte2g01805 230 MobiDBLite consensus disorder prediction 49 88 - -
Pte2g01805 230 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Pte2g01805 230 SMART HOX_1 87 149 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01805 Pte-Chr2 38023809 38025276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01805 89 204 Homeobox Transcription Factor Family AT4G37790 68.966 7.42e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte2g01805 Homeodomain 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01805 K09338 - qsu:111997626 226.483