Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01796 ATGGACAGTGTCTTCCTACTTGCTGACGGGGATCGAGCCTTTTATCTGCGATCCATACTGATACAAACTTTTGCTGGGACTTACATTTGCCTGTGGGAGTATAATCCTCAGCCATTGAATTGCTTGGTCTACAAGGATGGTTTCTTTGGTGGCGATAACAATCAAGCAAGCAGTTCCATGGGAAACAGTGGAGCTCATAGATTGTTCAATGAATACACTAAAACTCCAATACCCATTGATGTAAATGACGATCGCATCCCAGGGTTAGCTCTGAAGAATAATCGTCCTTACTTAGAACTTGGAGAGTTGGATCTTCTTACTAAGGCCTCAACTGACATGCAGAGACAGTTCTATCAGGAAGTGAGAATCAAGACTGCAGTTTTCATGGGATGCAACCTTGGAGAAATTGAGATAGGGTTTTCCTCTTTACCTAAGGCTGATATCCAAAGAGCTTTGATGAATTTGTTCCCCGATGACTTTTCTAAGCTTAGCCAACCAGTTGAACAATATCCACCTTCATCCTCATCATCTTCATTGAGATCGTTTTCCACCATGGATAGCCCTGAATACTCATCTCTCCTATTCAACATTCCCACCACTACTCAAATTCCAACAGCACTTGGTTTGCAGCAAATGCCAACCACAACTAGTAGTCCAACCCAACAAGCCATTCATACATTTGCTGAACTTCGTAACATACAGTTCCCCAGCCTGCAAACTGAAGAGGCTGTAATGACGAGAGCTCTCCTTGCTGTTTTCTCTTCATCTTCTTCGTCAACTTCAACTTCTCAACCAATACCACCATTTCAAAGCTTACCAAATTATAACACTCAAAGGGTAACATCAGAAGCTAGCGCTTTCAAAAACTACAGACAAGGTTTACGCCGTAGGGCATCAGTTGTTAGATCTACCATTGGCGGGCAAAGTATGATGAAGAGATCAATTGCATTCTTCAGAAACTTGAATTTAAGGAGACTTCAGGAACGTATGCAATCAAGTAGATACAACACTACTCAACTGCACCATATGATATCAGAGAGAAGAAGGCGGGAGAAGCTCAATGTGAATTTTCGGGCATTGAGAGAATTACTTCCTCCGGGAACGAAGAAAGATAAAGCTTCAATATTGACTTCAGCAAAGGAGACATTGAGCGCTTTGATGGCTCAAATAGAAGAGCTAAGCAAGAGAAATGAGCAGTTAGAGACACAGGTTATGCCTGCATCAAGTAGAGAAGCCAAGAAAGAAGCAGAAACGAGTTCCTCTAATGAAAGACTCGTTGTTGGAATTTCCCATGTAGCTGAATCCACCTCAGAAGCTAGATTCATCGACTTGCAAGTGACAGTAAGAGCGAGATGCCCTCAAGTTGATTTGATGATCTGCTTATTGGAATTCTTAAAGCAAGATCAGAATGTAAACTTGATTTCTTTTGACGCTAATACAAGAATACAAGATTCAACTCCAGTTAACAATGTCACATTGAGATTAAGCATTGAGGGGAGTGATTGGGACGAGTCTGCCTTCCAGGAAGCAATCAGAAGAGTGGTTTCTGACTTGGCACAATGA 1563 0.4184 MDSVFLLADGDRAFYLRSILIQTFAGTYICLWEYNPQPLNCLVYKDGFFGGDNNQASSSMGNSGAHRLFNEYTKTPIPIDVNDDRIPGLALKNNRPYLELGELDLLTKASTDMQRQFYQEVRIKTAVFMGCNLGEIEIGFSSLPKADIQRALMNLFPDDFSKLSQPVEQYPPSSSSSSLRSFSTMDSPEYSSLLFNIPTTTQIPTALGLQQMPTTTSSPTQQAIHTFAELRNIQFPSLQTEEAVMTRALLAVFSSSSSSTSTSQPIPPFQSLPNYNTQRVTSEASAFKNYRQGLRRRASVVRSTIGGQSMMKRSIAFFRNLNLRRLQERMQSSRYNTTQLHHMISERRRREKLNVNFRALRELLPPGTKKDKASILTSAKETLSALMAQIEELSKRNEQLETQVMPASSREAKKEAETSSSNERLVVGISHVAESTSEARFIDLQVTVRARCPQVDLMICLLEFLKQDQNVNLISFDANTRIQDSTPVNNVTLRLSIEGSDWDESAFQEAIRRVVSDLAQ* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01796 520 Coils Coil 376 403 - -
Pte2g01796 520 Gene3D - 334 410 IPR036638 GO:0046983
Pte2g01796 520 MobiDBLite consensus disorder prediction 397 420 - -
Pte2g01796 520 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Pte2g01796 520 SMART finulus 343 392 IPR011598 GO:0046983
Pte2g01796 520 Pfam Helix-loop-helix DNA-binding domain 341 386 IPR011598 GO:0046983
Pte2g01796 520 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 109 517 IPR044658 -
Pte2g01796 520 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 338 407 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01796 Pte-Chr2 37898333 37902337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01796 1 521 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 40.217 3.87e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g01796 HLH 6.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01796 - - cave:132166497 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01796 2 37898333 37902337 Pte2g01796 2 37898333 37902337 RCT