Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01793 ATGACGATACTTGTTGACGGTGACGGTGGCGGTGTGTTGTGCACAGCAGATTCATCTCATTCTTCGATGTCTCGAAAGCCCATCAACAAAATGGATAATGTTTACGGTACAATCGTCAAAACTGACAACATAACTCTGGTCGAGGACGATGATGATAGTGGTCGCTCCGATTCTTGCGTTTCATCTGACTGTGTTATAGTTGCTGACGCCGGTGGTGGAGAAGAAGGTTGCAGAAAGAAGGTGGCGTTAGCAGAAATGGAGGAGAAGGTAGGGACGGATGGAGTTGTTTTTCCTGTTGCCGTCAAGAAAGAGGAACCGGTGCTGCTTGACGATGTAGTGGATCGGGTGATTGCGTTTTCGTCTACATCTTCAACTGAACTGCCGAAACCCATGGAAGGATTGCACGAGGTGGGTCCACCTCCGTTCCTGAAGAAGACGTTTGAAATGGTGGAGGACCCGGAAACCGACTTGATTGTCTCGTGGAGTGAGGGTCTGGACAGTTTTGTAGTTTGGGATTCACACGAGTTCTCCAAAAATCTTCTTCCCAAATATTTCAAGCACAGTAATTTCTCCAGCTTCGTTCGCCAACTCAACACTTATGTAAGTTCACTCTCAAGATCCCACAAACCCTCTGCTCAATTTGGGTTTAAGAAGATTGATGCAGATCGTTGGGAGTTTGCAAATGAAGGGTTTCGTGGAGGAAAGAAGCATCTGTTGAAAAATATAAAAAGGAGGAGCAAGTATCACAAGTTGCAGCAAGGAGGGATGATGGGTTTAATGGGACCTGGGGGTGAAGCTGAGATGGAGAGACTGAGGAAGGATCACAGCATGTTGAAATTGGAAATCTTGAAGATGAGACAAAAGGCGGAGGAATCACAGACCAAAATCACAAGCATTGAGGATAGAATTCGGTGCTCCGAGGATAAGCAACATCAGATGCTTCTATTTCTCACCAAAATGGCAAGAAACCCCAGTTCAGTTCAGCAATTGTGTCAAAGGATGAAGCAGAGAAGAGAGCTTGATTTGAGTACTGAAATTGGAAAGAGGCGTAAGATACTCACAAACCAACAAGCTGCCAGTATTTCCAGTATCATGAATGCCACTTCTAATCTTGATCATATACAGTATGAACATGAAGAATTTGTTGGATTGCAATCTGAGCTCACTGGACTGTATTCCGAAGACATGGACACAAGCCACTTCATCGAAACTCCAGCATTATCTCCTGCCGTAAATAATCAACCATGTAGTCCTGTACATGGTTTGAAAGCCAGTGCTTGCAGAACAAGTGCAGCTGATCAGACGTCCCCATATCTCGTTGTGTCTGAGAAGCTGATGGGAGAAAATCCAGTTGTTGAAGACATATGTTTCAATGACACGAACATTTACTTTGAGTTGGAGGATTTGATTAGTAAGCCTAGTGATTGTGGTGGATTGACAAGTGGGATATTGGGAGAAGCTGGTTGCATAGGATCATAA 1479 0.4449 MTILVDGDGGGVLCTADSSHSSMSRKPINKMDNVYGTIVKTDNITLVEDDDDSGRSDSCVSSDCVIVADAGGGEEGCRKKVALAEMEEKVGTDGVVFPVAVKKEEPVLLDDVVDRVIAFSSTSSTELPKPMEGLHEVGPPPFLKKTFEMVEDPETDLIVSWSEGLDSFVVWDSHEFSKNLLPKYFKHSNFSSFVRQLNTYVSSLSRSHKPSAQFGFKKIDADRWEFANEGFRGGKKHLLKNIKRRSKYHKLQQGGMMGLMGPGGEAEMERLRKDHSMLKLEILKMRQKAEESQTKITSIEDRIRCSEDKQHQMLLFLTKMARNPSSVQQLCQRMKQRRELDLSTEIGKRRKILTNQQAASISSIMNATSNLDHIQYEHEEFVGLQSELTGLYSEDMDTSHFIETPALSPAVNNQPCSPVHGLKASACRTSAADQTSPYLVVSEKLMGENPVVEDICFNDTNIYFELEDLISKPSDCGGLTSGILGEAGCIGS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01793 492 FunFam Heat shock transcription factor 1 135 246 - -
Pte2g01793 492 SMART hsfneu3 138 245 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g01793 492 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 128 365 IPR027725 -
Pte2g01793 492 Gene3D - 135 246 IPR036388 -
Pte2g01793 492 Coils Coil 268 302 - -
Pte2g01793 492 PRINTS Heat shock factor (HSF) domain signature 193 205 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g01793 492 PRINTS Heat shock factor (HSF) domain signature 180 192 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g01793 492 PRINTS Heat shock factor (HSF) domain signature 142 165 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g01793 492 Pfam HSF-type DNA-binding 142 245 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte2g01793 492 SUPERFAMILY "Winged helix" DNA-binding domain 138 245 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01793 Pte-Chr2 37862223 37864635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01793 128 397 HSF AT2G26150 46.014 2.16e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte2g01793 HSF_DNA-bind 2.4e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01793 K09419 - qsa:O6P43_022426 413.305