LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g01791	ATGGAACCTAGGGTGGCCAACAAGTTTCGGCTTGGCCGGAAGATCGGTAGCGGCTCGTTTGGCGAGATCTATTTAGGTACTAATATCCAGACTAATGAGGAAGTCGCGATTAAGCTCGAAAATGTCAAGACTAAGCACCCTCAGTTGCTGTATGAATCAAAATTGTACAGAATTCTTCAAGGAGGAACTGGGATTCCAAATGTTAAATGGTTTGGAGTGGAGGGAGATTACAATGTTCTGGTGATAGATCTTCTTGGTCCTAGTCTCGAAGATCTTTTTAACTTTTGCAGTAGAAAGTTGTCATTGAAGTCAGTTCTAATGTTAGCTGATCAAATGATAAATCGTGTGGAGTTTGTGCATTCTAAGTCATTTCTTCATCGAGATATTAAACCCGATAATTTTCTGATGGGCTTAGGAAGGCGTGCAAACCAGGTAGTTTACATGATTGACTTTGGCCTGGCAAAGAAATATAGAGACAGTTCAACTCATCAACATATTCCTTACAGAGAAAATAAAAACTTGACTGGAACAGCAAGATATGCAAGCATGAATACTCATCTTGGTATCGAGCAAAGCAGGAGAGATGATTTAGAGTCTCTTGGTTATGTCCTGATGTACTTCCTCAGAGGAAGTCTTCCCTGGCAAGGACTGAAAGCAGGAACCAAGAAACAGAAGTATGAGAGGATTAGTGAGAAAAAGGTTTCTACCTCTATTGAGACACTGTGTCGGGGTTATCCAACCGAGTTTGCATCTTACTTCCATTACTGTCGATCATTACGATTTGATGACAAGCCAGATTATGCTTACCTTAAAAGGATATTCCGTGACCTCTTTATCCGCGAAGGTTTCCAGTTTGATTATGTATTTGATTGGACGATATTGAAGTATCAACAGTCACAGATGGCAACTCCTCCTGTACGTGCCCTTGGTCCTGGTGCAGGAACAAGTTCAGGAGTGCCCCTTGCTGTAGCGAATGCTGATAGACAGACAGGTGGGGAGGAAAGGCGATCATCTGCTTTAGTATCAGCGGATACCTCAAGGCGGAGAATGTCAGGACCACTACTAAATTCTGGGAGACAGAGAAGTCCTGCTGCCGATGCAGTTGTTGCTCTGTCATCAAACTCCAATATGGTGGGACAATCAAGTGGAGCACAAAGATTGTCTGGTATACAAATTAGCCCAGCAGCGGGTTCCTCTTCTGACCCAAGGCGGCCAGCATCATCTGGAAGATCTGCTCGGCTAAAGAATTATGATTCTGCACTAAATGGTATGGATAATTTGCAATTGGAAAGTGATGAGAGGGTCCGCCAATAA	1314	0.4315	MEPRVANKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVKWFGVEGDYNVLVIDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVVYMIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIETLCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQMATPPVRALGPGAGTSSGVPLAVANADRQTGGEERRSSALVSADTSRRRMSGPLLNSGRQRSPAADAVVALSSNSNMVGQSSGAQRLSGIQISPAAGSSSDPRRPASSGRSARLKNYDSALNGMDNLQLESDERVRQ*	438

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte2g01791	437	SUPERFAMILY	Protein kinase-like (PK-like)	6	291	IPR011009	-
Pte2g01791	437	MobiDBLite	consensus disorder prediction	378	406	-	-
Pte2g01791	437	MobiDBLite	consensus disorder prediction	325	362	-	-
Pte2g01791	437	ProSitePatterns	Protein kinases ATP-binding region signature.	15	38	IPR017441	GO:0005524
Pte2g01791	437	Pfam	Protein kinase domain	10	226	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pte2g01791	437	MobiDBLite	consensus disorder prediction	343	358	-	-
Pte2g01791	437	Gene3D	Transferase(Phosphotransferase) domain 1	1	308	-	-
Pte2g01791	437	ProSiteProfiles	Protein kinase domain profile.	9	279	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pte2g01791	437	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	124	136	IPR008271	GO:0004672\|GO:0006468
Pte2g01791	437	PANTHER	CASEIN KINASE-RELATED	8	362	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g01791	Pte-Chr2	37833435	37837316	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte2g01791	5	215	CBL-interacting serine-threonine protein kinases	AT5G58380	27.731	7.59e-13	68.2

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CK1_CK1	Pte2g01791		Pkinase	7.5e-26	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g01791	K02218		-	zju:107424125	709.138

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte2g01791	2	37833435	37837316	Pte2g01791	2	37833435	37837316	RCT

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