Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01773 ATGGGGGTGGACTACTACAATATTTTGAAAGTTGATAGCACTGCCACAGAAGATGATCTCAAGAAAGCGTATAGGAAGTTGGCAATGAAATGGCACCCGGACAAGAATCCAAACAATAAGAAAGAAGCCGAAGCCAAATTCAAGCAGATATCTGAAGCTTACGAGGTTTTAAGTGACCCCCAGAAAAAGGCCATCTATGATCAGCATGGAGAGGATGGCCTGAAAGACATGCCACCACCAGGAAGTGGTGGCGGCTCATCCGGCAATGGCAGTGGGTTTAATCCCAGGAATGCAGAAGACATATTTGCAGAATTCTTTGGTAGTAGCCCTTTTGGATTTGGATCCAGTGGAGCTGCAAAATCCAAGAGGTATTCTGATGGAGGAACTTTTGGAGGTTTTACTGGGAGTGACAATGCCTTCCGAGCAAATAATGAAAAGAAGAAGCCACCACCTATTGAAAGCAAATTGCCTTGCAGCCTTGAAGAGTTGTACACTGGATCATCAAGGAAGATGAAAATCTCAAGAACTGTGATGCGAGCCAATGGGCGTTCAGCTGCAGAAACTGAGATTTTAACCATCGATATAAAGCCTGGGTGGAAGAAGGGAACCAAGATTACTTTCACAGATAAAGGGAATGAGCAGCCAAATCAGCTATCAGCAGATCTTGTGTTTGTGATTGATGAAAAGCCTCATGATATGTACACCAGAGATAGCAACGACCTCCTAGTAACTCATAAGATTTCATTGGCGGAGGCACTGGGAGGAACAACTGTACATCTGACAACACTTGATGGTCGTGATTTACCGATTCCAGTGACCGATATTGTGAACCCCGGGTATGAGCTTGTCGTTAAGAATGAGGGCATGCCAATAGCTAAAGAGCCAGGTAATAGGGGTGATTTGAAGATAAGGTTTGAGGTCAAATTCCCAACTAAATTGACATCTGACCAACGAGCAGGACTAAGGAAAGCACTGGGAACTTAG 984 0.4441 MGVDYYNILKVDSTATEDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKKAIYDQHGEDGLKDMPPPGSGGGSSGNGSGFNPRNAEDIFAEFFGSSPFGFGSSGAAKSKRYSDGGTFGGFTGSDNAFRANNEKKKPPPIESKLPCSLEELYTGSSRKMKISRTVMRANGRSAAETEILTIDIKPGWKKGTKITFTDKGNEQPNQLSADLVFVIDEKPHDMYTRDSNDLLVTHKISLAEALGGTTVHLTTLDGRDLPIPVTDIVNPGYELVVKNEGMPIAKEPGNRGDLKIRFEVKFPTKLTSDQRAGLRKALGT* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01773 327 Gene3D - 231 311 - -
Pte2g01773 327 Pfam DnaJ C terminal domain 152 310 IPR002939 -
Pte2g01773 327 CDD DnaJ_C 150 313 - -
Pte2g01773 327 FunFam DNAJ heat shock family protein 230 325 - -
Pte2g01773 327 CDD DnaJ 4 59 IPR001623 -
Pte2g01773 327 FunFam DNAJ heat shock family protein 3 118 - -
Pte2g01773 327 Gene3D - 151 229 - -
Pte2g01773 327 MobiDBLite consensus disorder prediction 58 94 - -
Pte2g01773 327 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pte2g01773 327 SUPERFAMILY Chaperone J-domain 3 113 IPR036869 -
Pte2g01773 327 SMART dnaj_3 3 62 IPR001623 -
Pte2g01773 327 MobiDBLite consensus disorder prediction 133 155 - -
Pte2g01773 327 Pfam DnaJ domain 4 67 IPR001623 -
Pte2g01773 327 FunFam Dnaj homolog subfamily b member 147 229 - -
Pte2g01773 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 151 232 IPR008971 GO:0006457|GO:0051082
Pte2g01773 327 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pte2g01773 327 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 325 - -
Pte2g01773 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 234 319 IPR008971 GO:0006457|GO:0051082
Pte2g01773 327 Gene3D DnaJ domain 3 136 IPR036869 -
Pte2g01773 327 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pte2g01773 327 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pte2g01773 327 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pte2g01773 327 PRINTS DnaJ domain signature 62 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01773 Pte-Chr2 37563881 37565940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01773 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 1.44e-10 60.5