Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01771 ATGGCTTTGATGAGAATGGCTAACCAAAACGCTGCTTATAATAACAGTTCAGACAAACGGTTAGAGAATCAAGGGGCAGTTTTCCATGACTTTCTGGGCGTGAAGCCTGGTGACTCCTCATTGGTTTTTTCTTCTAAAGCTGTTGATTTGAGACTGTCAGAGCCCTCTCCCTCTTCAGCTAGTGCCCTTGGCCCTATATCTACTACTGATGTGGGTTCAGAAAGACAGGTTGACAATCATCTCGAGGGAGTGCCATTTTATGGACCAGGGAGTGACATTTCTTTAGCTGAGATCAGAAAACTAGTAGGCAAGAGAAGTAACTCAGACTCCAGTTTCATGGGATCATCTAGAGATGGATTCACTCAAATTCCCCCTGATTCTCTTCAAAACTCTCATTTGATGAAGTTGTTTTATGTACAGATCCTCCGAAATTCTACAGGTGGTGAACGATATAAGAGTTACAATGATGAAGAAGCAATTCTTGGCATGCAGCAGCTACGGCCAATCTCTACTGCTCCTACATTACATCCACCTTTTGGCAATAAGGTTGACGCTAGTGTCTCAACATGGGAGCGATCTATTCTCATGAATGCTGGTCCAGCCATGCAGCTGCCATCACGTGGTCTTCCAGTCACGTCTTTTGCGCATCAGGTAGGCTCTAACAAGGTTAGAGATGCCAATGCTGGTCCTTCATTTATATCTCAGTTAGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGGCTTGGAATCTTGAGTTCCATTAAAGCAAGCACTCCTGCCTCAGAGAGAGTTCCATCTGGGGTACTTTTAAGTGGCAGCAGACAGAAGTCTGGCACTAACATTATAGAGGTAGAGGGTTCCACTCCTCCAAGTCAAAGCGAATTGGCATCTTCAAGCCGGCAAATGACTATATTTTATGGTGGTCAGGCTCATGTATATGATGATGTCCATCCTGACAAGGCAGATATTATAATGGCTTTGGCTGGATCAAATGGAGGGTCATGGTCCACCACGTACTCACCCAAATCTACAGAAAAAGTAGCTGGTGAAGGGGATGTGCTAAGTGGAGAAAATGAGATAGGTGTAGGGAATAAAAGAGCATATCCTCAGGAACTTCAAGGTAGATTGCCAGTAGCTGCCATCAACTCTGAGGATAGGCTAGTTACCCCATCAGGGTTACATCAGGTAAGCAACGCAAGATACATAAAGAGCTGCATTTCAAGCAGCGGAAACGAGCTCTGA 1245 0.4474 MALMRMANQNAAYNNSSDKRLENQGAVFHDFLGVKPGDSSLVFSSKAVDLRLSEPSPSSASALGPISTTDVGSERQVDNHLEGVPFYGPGSDISLAEIRKLVGKRSNSDSSFMGSSRDGFTQIPPDSLQNSHLMKLFYVQILRNSTGGERYKSYNDEEAILGMQQLRPISTAPTLHPPFGNKVDASVSTWERSILMNAGPAMQLPSRGLPVTSFAHQVGSNKVRDANAGPSFISQLAADEGSRTGMKGLGILSSIKASTPASERVPSGVLLSGSRQKSGTNIIEVEGSTPPSQSELASSSRQMTIFYGGQAHVYDDVHPDKADIIMALAGSNGGSWSTTYSPKSTEKVAGEGDVLSGENEIGVGNKRAYPQELQGRLPVAAINSEDRLVTPSGLHQVSNARYIKSCISSSGNEL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01771 414 ProSiteProfiles Tify domain profile. 296 331 IPR010399 -
Pte2g01771 414 SMART tify_2 296 331 IPR010399 -
Pte2g01771 414 Pfam tify domain 298 330 IPR010399 -
Pte2g01771 414 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 228 363 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01771 Pte-Chr2 37502105 37511793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01771 19 329 Tify Gene Family AT4G32570 35.258 3.10e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte2g01771 tify 3.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01771 - - qsa:O6P43_015637 457.603