Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01762 ATGGGCAGGCCACCTTGCTGTGACAAGACCGGCGTTAAAAAAGGTCCATGGACGCCAGAGGAAGACATCGTTTTGGTCTCTTACATTCAAGAACATGGACCTGGCAACTGGAGATCTGTTCCCAGCAAAACAGGTTTGCTCAGATGCAGTAAGAGCTGTCGTCTCAGATGGACAAATTATCTGAGGCCTGGAATTAGAAGGGGTAACTTCACTGATCAGGAGGAGAAGATGATAATCCATCTGCAAGCTCTGCTAGGCAATAGATGGGCTGCCATAGCCTCCTACCTTCCGGAGAGAACCGACAACGACATCAAGAATTATTGGAACACCCATCTGAAGAAGAAACTGAAGATGAACCGCACAGGAATCGAGAGCCATGGCCAAGATGGTTTATCATCTTCGCAGCCCAAGGACCAATGGGAGAGAAGGCTTCAAACAGATATCCACATGGCCAAGCGAGCATTGCTTAAGGCATTGTCCCTTGACAAGGACACTGAGCGTGTATCCCAATTTGATTGTAACTCCTCTGACATGAACAGTGGACCTCATCAAGCGTCATCATCGTCATCGTCCTATGCTTCAAGTGCTGAAAACATAGCACGATTGCTTGAAAATTGGGTGAAGAAACCTTCAAAATCAGTGGTTAATCAAAATTCATTGGCCATATTTGACACTGCTGGTTCGGCCAGTTCAAGCGAAGGGACACAGACTACTATAACACCCGATGCCTTCAACTCACAATGGCCCATCAGCTATAGCAACCCTCATGATGTGTCTCAATCTGGATCGGCAGAAGAGACATCCAGGAATACGAGGCCTAATGCTACACTCTGGCAACCTGAAAGTAAACCAAACTTGGAGGCCACTGCGCAATTCACAATGATAGAGAAATGGCTATTTGATGATAGCAGAGTTCAAGTCCAAGGACATGAAGATCTGATCAACGTGTCACTGCAAGAAACTTCAGTAGAGTTATGGTAG 981 0.4638 MGRPPCCDKTGVKKGPWTPEEDIVLVSYIQEHGPGNWRSVPSKTGLLRCSKSCRLRWTNYLRPGIRRGNFTDQEEKMIIHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKMNRTGIESHGQDGLSSSQPKDQWERRLQTDIHMAKRALLKALSLDKDTERVSQFDCNSSDMNSGPHQASSSSSSYASSAENIARLLENWVKKPSKSVVNQNSLAIFDTAGSASSSEGTQTTITPDAFNSQWPISYSNPHDVSQSGSAEETSRNTRPNATLWQPESKPNLEATAQFTMIEKWLFDDSRVQVQGHEDLINVSLQETSVELW* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01762 326 Gene3D - 13 66 - -
Pte2g01762 326 MobiDBLite consensus disorder prediction 172 192 - -
Pte2g01762 326 CDD SANT 69 112 IPR001005 -
Pte2g01762 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte2g01762 326 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte2g01762 326 CDD SANT 16 61 IPR001005 -
Pte2g01762 326 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte2g01762 326 FunFam Transcription factor MYB30 68 126 - -
Pte2g01762 326 FunFam MYB-related transcription factor 13 66 - -
Pte2g01762 326 MobiDBLite consensus disorder prediction 226 282 - -
Pte2g01762 326 Gene3D - 69 143 - -
Pte2g01762 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 242 - -
Pte2g01762 326 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pte2g01762 326 SMART sant 13 63 IPR001005 -
Pte2g01762 326 SMART sant 66 114 IPR001005 -
Pte2g01762 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pte2g01762 326 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pte2g01762 326 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01762 Pte-Chr2 37381198 37383475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01762 1 309 MYB Transcription Factor Family AT5G62470 50.704 2.48e-102 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte2g01762 Myb_DNA-binding 1.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01762 K09422 - zju:107407717 419.468