Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01728 ATGGAGGGTAGTGCCACTGACAAGCTCCCTTGTGGAAATGGTGCTGAGGAAGCTGGAGCTCCTATTGAGATAAAAATAAAAACACTGGATTCACAAACATATACTCTTAGAGTGGACAAGCAGGTGCCAGTACCTGATTTGAAAGAGCAAATTGCTTCTGTAACTGGTGTGTTATCAGAGCAACAGCGTTTAATTTGCCGTGGAAAAGTTTTAAAGGATGATCAGCTGCTGTCTGCCTATCAAGTGGAAGATGGTCACACCTTGCATTTGGTTGCCCGGCAACCTGACCTAGCATCATCTGGTTTACCTCATCATCAAGCTAGTGACCCAAACTCAAGTGGAAGTCATGGACACAATAGTCAATCGTCTCCTGGTGTTGTGATTGAAACATTCAATATGCCTGTTCGGGGGGACAGAGTTACTCCTGATATCAGTAGGATTTTCTCTGCAGTTATTGGATCTATTGGAATTTCAAACATAGTTGGTGGAACTGAAGGGATTGGTGTCAGGGAAAACGACCCGCAGAGACTTGACAGAACAACAGGTTTAAGTGGCATATCAGAGCCATCTCACCCTCAACCTGATCAAGCTGGTGTGCAGGGTCTAACTGAAGGTTTACGTGGTATTTTTGGATTTCCATCTGCAGTTTCTTTGGGATCCCATCCTCAGGTTATTCCCGATTCTTTGAGTACTATGTCACTGTACCTAAGTCATATGAGGAGCCAATTTGATGCTATAGTCACAGATCCAGTGAACAATGTCCAAGCAGCTGAGCTGCGTCAGCAAGAAGAAAGAGGGTCTGAGACATCATCTCCAGGTGCCAGAAACCAAGGGTTCTTATCACCTGCATCATTGGCTGAAGTCTTGCTTTCAACTAGAAACATTTTCATTGGACAAGCTGGGGAGTGTGTCCTTCAACTTGCTAGACAATTGGAGAGTCAAGCAAATATAGATGATCCCTTGATGCGCTCAAACATGCAGTCTAATGCATTAAGAACTGGAGGTCAATTATATAATCTAGGAGCTTTCCTCCTTGAAATTGGCCGCACAACCATGGCACTGCGTCTGGGTCAGACACCGTCTGAGGCTGTAGTTAGTAGCGGACCTGCTGTTTTTATATCCTCATCAAGTCCTAATCCTATCATGGTTCAGCCTCTTCCTTTCCAATCAGTTTCAAGCTTGGGTTCTGTTCCTGTGGGAGCTGCACCATCTGTCTCTGGGTTTCTCCCTAGGCGCATTGATATACAAATAAGGCGAGGCTCGTCAACATCCACTCACAATATGAATCGTGAGGAGGACCGTGGTGACTGGCAACATTCAACAACACAGAGAAATCTAGGTGAAGATTCTGTTAATCATGCAACTTCAAGAGATTCTGAAGGTACATCTCTTCCTGGGGAGTCAGTAGTAAGGGTAGTGCCGATAAGAACTGTGGTTGCAAGTTTACCTGGTTCCTTCAGTCTCCCTTCAGAATCACTTGGAACATTACCAACTCTAAATACAAGACAAGAGATGCCTAATGCTCGCACTGTCGATGTTAATGTTCTAACATCTGGTGGCGCTCAAAGGAACCAAGAATCTGAGCAGCAAATGCCCAATCATGTACTTCAGTTTTTAAGAGGTGCCTTTCCTGGCGGTGAAATCCATGTAGAAGGTTCTACTTTACAAGGAACAGCCGCAACTTCTGAGGAGGCTGGGATAGCTAGAGGTGCAGCTCAAGTGCCAGAAGCAGAAGCTAATGTTAGTGATGAAGGGGTATTCTTGTCTAATTTACTGCGTGAAATCATGCCTGTCATCTCTCAACATACTGGTGGAGAGGCAAATGCTTCCTCACTAGCGCCTAACTCTTCGAGTGAACCTCTGGCGAGAGAATCTGCTAACCATGCTGGGACTAATGCTGGTACGTCAAGGAGGTATGATGATAATGAATCAAGCTCACCAAGTTCAAAACGTCAAAAGGTATTTGATGGCCATGAAGGTAAGTGCAACAGAATGTATGTCTGA 2004 0.4491 MEGSATDKLPCGNGAEEAGAPIEIKIKTLDSQTYTLRVDKQVPVPDLKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYQVEDGHTLHLVARQPDLASSGLPHHQASDPNSSGSHGHNSQSSPGVVIETFNMPVRGDRVTPDISRIFSAVIGSIGISNIVGGTEGIGVRENDPQRLDRTTGLSGISEPSHPQPDQAGVQGLTEGLRGIFGFPSAVSLGSHPQVIPDSLSTMSLYLSHMRSQFDAIVTDPVNNVQAAELRQQEERGSETSSPGARNQGFLSPASLAEVLLSTRNIFIGQAGECVLQLARQLESQANIDDPLMRSNMQSNALRTGGQLYNLGAFLLEIGRTTMALRLGQTPSEAVVSSGPAVFISSSSPNPIMVQPLPFQSVSSLGSVPVGAAPSVSGFLPRRIDIQIRRGSSTSTHNMNREEDRGDWQHSTTQRNLGEDSVNHATSRDSEGTSLPGESVVRVVPIRTVVASLPGSFSLPSESLGTLPTLNTRQEMPNARTVDVNVLTSGGAQRNQESEQQMPNHVLQFLRGAFPGGEIHVEGSTLQGTAATSEEAGIARGAAQVPEAEANVSDEGVFLSNLLREIMPVISQHTGGEANASSLAPNSSSEPLARESANHAGTNAGTSRRYDDNESSSPSSKRQKVFDGHEGKCNRMYV* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01728 667 MobiDBLite consensus disorder prediction 178 197 - -
Pte2g01728 667 Gene3D - 16 116 - -
Pte2g01728 667 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 15 487 - -
Pte2g01728 667 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Pte2g01728 667 MobiDBLite consensus disorder prediction 416 465 - -
Pte2g01728 667 MobiDBLite consensus disorder prediction 98 125 - -
Pte2g01728 667 FunFam Large proline-rich protein BAG6 14 107 - -
Pte2g01728 667 MobiDBLite consensus disorder prediction 605 642 - -
Pte2g01728 667 MobiDBLite consensus disorder prediction 605 667 - -
Pte2g01728 667 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Pte2g01728 667 MobiDBLite consensus disorder prediction 440 463 - -
Pte2g01728 667 PRINTS Ubiquitin signature 32 52 IPR019956 -
Pte2g01728 667 PRINTS Ubiquitin signature 74 95 IPR019956 -
Pte2g01728 667 PRINTS Ubiquitin signature 53 73 IPR019956 -
Pte2g01728 667 MobiDBLite consensus disorder prediction 425 439 - -
Pte2g01728 667 SMART ubq_7 22 93 IPR000626 GO:0005515
Pte2g01728 667 MobiDBLite consensus disorder prediction 166 198 - -
Pte2g01728 667 MobiDBLite consensus disorder prediction 643 660 - -
Pte2g01728 667 MobiDBLite consensus disorder prediction 104 125 - -
Pte2g01728 667 SUPERFAMILY Ubiquitin-like 20 102 IPR029071 -
Pte2g01728 667 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01728 Pte-Chr2 36885726 36894225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01728 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 1.83e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01728 K23390 - qsa:O6P43_023769 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01728 2 36885726 36894225 Pte2g01728 2 36885726 36894225 RCT