Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01724 ATGGCTGGAATGCTTCCAGGAGTTGAAGCTGCTAGAAGGAGAAGGGTCCATCTGAGTGGAGGATGCAACGATCTGCCAAGCATGGCTGCTCATAAATTAACAAGGCGGGCTTCTTTCTGTTTATACTCAAGCAACCATGACGCTCATCATTCTTCATACTCCATAATACAGACGAGAAGCATAGTAAATCAGGCACACAAGGATGACAAGCTAGTAGGTGTGGCCAGAGAAGCTAAACAGAGGTTGGATGAAAAGTTGAGAACTTTACAAAGGACAACTCAGACTAGCAGAAGGGAAAGTGGAAAAGGAAAATTGAGCTGTGTGGAAGGTCATTCAGCTATAACAAGGAAGTTGCACACTGAGGTATATGGATCAAAGAAAGGTGGGTTGAGGAGGTTCAGTTGGGCCAAAATTAGCAAAAAGGGTTGTGACCAAGATGAGTGTGCTGTGTGTTTGGAGTCATTCAAGATGGGCGAGATACTGATGCACCTGCCCTGTTCTCATAGGTTCCACTCAAGGTGCTTGCAGCCATGGCTGGAAAATAGTGCTCACTGCCCTTGTTGCAGAACTGGGATATCATCTTCTTCATAG 591 0.4552 MAGMLPGVEAARRRRVHLSGGCNDLPSMAAHKLTRRASFCLYSSNHDAHHSSYSIIQTRSIVNQAHKDDKLVGVAREAKQRLDEKLRTLQRTTQTSRRESGKGKLSCVEGHSAITRKLHTEVYGSKKGGLRRFSWAKISKKGCDQDECAVCLESFKMGEILMHLPCSHRFHSRCLQPWLENSAHCPCCRTGISSSS* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01724 196 Coils Coil 72 99 - -
Pte2g01724 196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 195 IPR013083 -
Pte2g01724 196 PANTHER SI:CH211-59O9.10 116 195 - -
Pte2g01724 196 Pfam Ring finger domain 146 189 IPR001841 -
Pte2g01724 196 ProSiteProfiles Zinc finger RING-type profile. 148 189 IPR001841 -
Pte2g01724 196 FunFam Zinc finger family protein 122 194 - -
Pte2g01724 196 SMART ring_2 148 188 IPR001841 -
Pte2g01724 196 CDD RING-H2_PA-TM-RING 147 189 - -
Pte2g01724 196 SUPERFAMILY RING/U-box 141 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01724 Pte-Chr2 36839986 36841458 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01724 1 92 C3H Transcription Factor Family AT2G15580 47.573 4.97e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01724 - - cave:132184843 253.062