Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01723 ATGAGCTCGAAGGAGAAACCCACTCTCGGTGGCACGCGGATTAAGACCCGCAAACGGAATATTGCAGCACCGCTGGACCCTGCAGCATTTTCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGAGTGTAGAATCTTTAGACCTCAACTTCTCGAGATACGGTGATACTTTCTTTGAGGTTGTTCTCACTGGGGGCCGTACGCAACCTGGAACTATCAAGCCTGATGAGGGGGAGCGCCATCCCTATTCCATAATAGATTGCGAGCCAAGACGTGAAGTCCTGTTACCGTATGTGATATACATACAAAAAATTTTGCGCAGGAAGCCCTTCCTCATAAAAAATCTTGAAAATGTCATGCAAAGATTCCTGCAGTCCTTGGAACTCTTCGAAGAAAATGAGAGGAAAAAATTGGCAATCTTCACAGCACTTGCTTTTTCGCAGAAGCTTTCTGGACTTCCACCAGAGACCGTCTTCCATCCACTTCTTAAGGATAATCTTGTTGCCAAAGGGCTAGTTCTGTCTTTCATAACTGACTTTTTCAAGGAGTATCTGGTTGATAATAGCCTTGATGATCTCATTTCAATTCTGAAACGGGGAAAAGTGGAGGATAATCTGTTGAATTTTTTTCCAACTGCAAAGCGATCTGCTGAAGCATTCTCTGAGCATTTTACCAAGGAAGGTCTCTTGGCATTGGTTGAGTACAATGAAAAGAAAATCTTTGAGGTGAAGCTGAAGGAGATGAAATCTGCCTTGACGACCCAAATAGCAGAGGAGGCTGATATAGCTGATGTTATTGAAACACTGAAGCAACGTGTTAAAGATGCAAATCTGCCAGATATTGAGGTTGTGAGGGTTTCTTGGGATGTTCTGATGGATGCTGTTCAGTGGTCTGGGAAGAACCAGCAACAGAATGCTAACGCTGCTCTGCGCCAGGTAAAAACTTGGGCAAAGCTGTTGAATACTTTCTGTACTACTAGAAGGCTTGAGCTGGAACTCATATACAAAGTTCAGATGCAATGCTATGAGGATGCTAAGTTGATGAAGCTATTCCCCGAGATTGTTAGGTCTCTGTATGACCAGGATGTGCTTGCAGAGGACACAATCCTTCACTGGTTTCGCAAGGGAACCAACCCCAAGGGCAGGTATATCTGTTTCTACGTTAACAGCCCACTGTGTGCATTCTTTGATTCTAAGATGCCTAAACGCAACTCTTGCTGCTTTTGTTTCCCTGCCTTTTGTAATTTTGGATGGCGTTATTATGTTGATACCATACCTTGGAGCAAAGGACTTCCGGATGAACCTACTCTATTTGCAGGGCCCTTCATTTATGACGTACCCATGAAGCACTTAAAGTTTATAGTATTTGATCCTTTGGCTTTATTATTTAACACTAGCATTTTCTGCTGTCGTGTGCCACAGGCAAACTTTTGTGAAGGCACTGGAACCATTTGTGAATTGGCTGGAGGAGGCGGAAGAGGAAGAGTAAAGGCGTTTCTTATATTTCCATAG 1536 0.4355 MSSKEKPTLGGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELVAKSVESLDLNFSRYGDTFFEVVLTGGRTQPGTIKPDEGERHPYSIIDCEPRREVLLPYVIYIQKILRRKPFLIKNLENVMQRFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFHPLLKDNLVAKGLVLSFITDFFKEYLVDNSLDDLISILKRGKVEDNLLNFFPTAKRSAEAFSEHFTKEGLLALVEYNEKKIFEVKLKEMKSALTTQIAEEADIADVIETLKQRVKDANLPDIEVVRVSWDVLMDAVQWSGKNQQQNANAALRQVKTWAKLLNTFCTTRRLELELIYKVQMQCYEDAKLMKLFPEIVRSLYDQDVLAEDTILHWFRKGTNPKGRYICFYVNSPLCAFFDSKMPKRNSCCFCFPAFCNFGWRYYVDTIPWSKGLPDEPTLFAGPFIYDVPMKHLKFIVFDPLALLFNTSIFCCRVPQANFCEGTGTICELAGGGGRGRVKAFLIFP* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01723 511 Gene3D - 242 395 - -
Pte2g01723 511 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 386 IPR003307 GO:0005515
Pte2g01723 511 Coils Coil 121 141 - -
Pte2g01723 511 SUPERFAMILY ARM repeat 251 380 IPR016024 -
Pte2g01723 511 ProSiteProfiles W2 domain profile. 246 414 IPR003307 GO:0005515
Pte2g01723 511 FunFam ARM repeat superfamily protein 243 405 - -
Pte2g01723 511 CDD W2_eIF5C_like 216 390 IPR043510 -
Pte2g01723 511 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 2 392 - -
Pte2g01723 511 SMART 542_3 325 406 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01723 Pte-Chr2 36821461 36825910 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01723 300 380 Eukaryotic Initiation Factors Gene Family AT2G34970 35.366 9.47e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01723 - - rcu:8274281 703.745