Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01712 ATGTTCATTTTAACATGCAAATACGTTTGTGTATGGCAGGAGCATATCCCAGTTGATGAAGTGTTTAAGCAACTGAAATGCAGCAGACAGGGTTTGACAAAAGAGGAGGGAGAGAAAAGGCTTCAGATCTTTGGCCCTAATAAGCTTGAGGAGAAAAAGGACAGCAAGATTCTGAAGTTCTTAGGGTTCATGTGGAATCCTCTCTCATGGGTTATGGAGGCTGCAGCCATCATGGCCATTGCTTTGGCCAATGGAGGGGGCAAGGCACCGGACTGGCCTGATTTTGTTGGCATCGTAGTATTGTTATTCATCAACTCAACCATCAGCTTTATCGAAGAAAACAATGCTGGCAATGCAGCTGCTGCTTTGATGGCGGGTCTTGCACCCAAAACCAAGGTGTTGAGGGATGGTAAATGGTGTGAGGAAGAAGCAGCAATACTGGTACCGGGAGATGTCATCAGCATCAAGCTCGGAGACATTGTCCCAGCTGATGCTCGTCTCCTGGAGGGAGATCCACTCAAGATTGACCAGGCAGCTCTCACTGGTGAGTCATTGCCAGTCACCAGAAACCCAGGAGATGAGGTCTTCTCAGGCTCTACTTGCAAACAGGGTGAGATCGAAGCTGTTGTTATCGCAACTGGTGTCCATACTTTCTTTGGCAAGGCTGCTCACCTTGTGGACAGCACCAACCAAGTTGGTCATTTCCAGAAGGTGTTAACAGCCATTGGCAATTTCTGCATCTGCTCGATTGCTGCGGGAATGGTGATTGAAATCTTAGTGATTTACCCAGTCCAGAAAAGGCCTTATAGGGAAGGAATTGACAACTTGCTGGTGCTTTTGATTGGAGGTATCCCAATTGCCATGCCAACTGTTTTGTCTGTGACCATGGCTATTGGGTCTCACCGCTTGTCTCAGCAAGGTGCCATCACCAAGAGGATGACAGCTATAGAGGAAATGGCAGGAATGGACGTCCTTTGCAGTGACAAAACTGGAACTCTCACCCTCAACAAGCTTACTGTGGACAAGAATCTAATTGAGGTGTTTCCTAAGGACGTGGATAGAGATGCTCTTGTCTTGTACTCTGCTAGGGCATCTAGGGTAGAAAACCAAGATGCCATTGATGCATCAATTGTGGGAATGTTGGCTGATCCCAAGGAGGCTAGAGCTGGAATCACCGAGGTGCACTTTTTGCCCTTCAACCCCGTCGAGAAACGCACAGCAATTACCTACATCGACTCTAATGGTGATTGGCACAGGTCCAGCAAGGGTGCTCCTGAGCAAATAATTGAACTTTGCCAACTCCAAGGAGAGACATTGAAAAAGGCCCATCATATCATCGACCAATATGCTGAACGTGGTCTTCGTTCCTTGGGTGTTGCCAGACAGACCGTTCCAGAGAAATCCAAGGAGAGCGCCGGAGAACCATGGGAGTTCTTGGGTCTCTTGCCCCTCTTTGATCCTCCAAGGCATGATAGTGCAGAGACCATCCGCAGAGCCCTTGAACTTGGTGTTAATGTTAAGATGATAACTGGTGATCAACTTGCCATTGGAAAAGAAACCGGACGTAGACTTGGTATGGGCACCAATATGTACCCATCATCTTCTCTTCTTGGTCAGACTAAGGATGAAGCTATTGCTTCAATGCCCATTGATGAGCTTATTGAGAAGGCCGATGGTTTCGCTGGAGTTTTCCCAGAGCACAAATATGAGATCGTCAAGAGGTTGCAGGACAAGAAGCACATTGTTGGGATGACTGGTGATGGTGTCAACGATGCCCCTGCACTGAAGAAGGCAGACATTGGTATTGCAGTTGCTGATGCTACCGATGCAGCAAGGAGTGCTTCTGACATTGTCTTGACAGAACCAGGTCTAAGTGTGATCATTAGTGCTGTGCTCTCAAGCAGGGCCATCTTCCAGAGGATGAAGAACTATACAATCTATGCTGTTTCCATCACAATTCGTATTGTGCTTGGTTTCATGCTTGTTTCCCTTATCTGGAAGTTTGACTTCTCACCTTTCATGGTTCTCGTCATTGCCATCTTGAATGATGGAACCATCATGACCATCTCTAAGGATAGAGTGAAACCATCTCCTTTGCCTGACTCATGGAAGCTTGGAGAAATCTTTGGTACTGGAATCGTCCTTGGGGCCTACATGGCAATCATGTCTGTTATTTTCTTCTATCTCGTCCATGACACTGACTTCTTCACAGAATCATTCGGTGCAAGACCATTGAAGCATGACTCTGAAGAGCTCAACTCAGCATTGTACCTTCAAGTGAGTATCATTAGTCAAGCTTTGATCTTCGTGACGAGATCAAGGAGTTGGTCATTCATGGAACGTCCTGGTTTGTTGCTTGTCGGAGCCTTCTTTGCAGCACAACTGGTGGCCACTCTCATTGCTGTCTATGCACACATGGAATTTGCCAGAGTCAAGGGAATTGGCTGGGAATGGGCAGGAATTATTTGGCTGTACAGCCTTGTGACATACATACCTCTTGATATTCTCAAGTTTGTCATCCGCTATGCTTTGAGTGGCAAGGCATGGGACAACCTTCTTGAGAAGACTGCTTTCACAAGCAAGAAGGATTATGGAAAGGGAGAGAGGGAGGCACAATGGGCCACAGCACAACGTACATTGCATGGTCTCCATTCCTCAGAAGGTGACAAGAACTACAAAGAGCTCTCTGAAGTTGCCGAGCAGGCAAAGAAGCGAGCTGAGATCTCTAGGCTGAGAGAGCTTCATACTCTAAAGGGACATGTTGAATCAGTAGTGAAGCTCAAGGGATTGGACATTGAGACCATCCAGCAACATTACACTGTTTAA 2826 0.4689 MFILTCKYVCVWQEHIPVDEVFKQLKCSRQGLTKEEGEKRLQIFGPNKLEEKKDSKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKAPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEEEAAILVPGDVISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTRNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAAGMVIEILVIYPVQKRPYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPKDVDRDALVLYSARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVEKRTAITYIDSNGDWHRSSKGAPEQIIELCQLQGETLKKAHHIIDQYAERGLRSLGVARQTVPEKSKESAGEPWEFLGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQTKDEAIASMPIDELIEKADGFAGVFPEHKYEIVKRLQDKKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLSSRAIFQRMKNYTIYAVSITIRIVLGFMLVSLIWKFDFSPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLGEIFGTGIVLGAYMAIMSVIFFYLVHDTDFFTESFGARPLKHDSEELNSALYLQVSIISQALIFVTRSRSWSFMERPGLLLVGAFFAAQLVATLIAVYAHMEFARVKGIGWEWAGIIWLYSLVTYIPLDILKFVIRYALSGKAWDNLLEKTAFTSKKDYGKGEREAQWATAQRTLHGLHSSEGDKNYKELSEVAEQAKKRAEISRLRELHTLKGHVESVVKLKGLDIETIQQHYTV* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01712 941 Gene3D - 323 622 IPR023214 -
Pte2g01712 941 Pfam Cation transporter/ATPase, N-terminus 15 78 IPR004014 -
Pte2g01712 941 PRINTS H+-transporting ATPase (proton pump) signature 757 778 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01712 941 PRINTS H+-transporting ATPase (proton pump) signature 442 460 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01712 941 PRINTS H+-transporting ATPase (proton pump) signature 616 641 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01712 941 PRINTS H+-transporting ATPase (proton pump) signature 585 601 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01712 941 PRINTS H+-transporting ATPase (proton pump) signature 557 573 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01712 941 Gene3D - 129 213 - -
Pte2g01712 941 FunFam Plasma membrane ATPase 338 485 - -
Pte2g01712 941 FunFam ATPase 4 plasma membrane-type 572 812 - -
Pte2g01712 941 SMART Cation_ATPase_N_a_2 12 84 IPR004014 -
Pte2g01712 941 Pfam haloacid dehalogenase-like hydrolase 322 599 - -
Pte2g01712 941 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 844 IPR023298 -
Pte2g01712 941 Coils Coil 892 912 - -
Pte2g01712 941 FunFam Plasma membrane ATPase 129 213 - -
Pte2g01712 941 ProSitePatterns E1-E2 ATPases phosphorylation site. 328 334 IPR018303 -
Pte2g01712 941 Gene3D - 91 812 - -
Pte2g01712 941 Gene3D - 338 485 IPR023299 GO:0000166
Pte2g01712 941 CDD P-type_ATPase_H 31 838 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte2g01712 941 SFLD Haloacid Dehalogenase 308 636 - -
Pte2g01712 941 NCBIfam HAD-IC family P-type ATPase 560 665 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01712 941 NCBIfam HAD-IC family P-type ATPase 98 346 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g01712 941 SUPERFAMILY HAD-like 322 631 IPR036412 -
Pte2g01712 941 PANTHER CALCIUM-TRANSPORTING ATPASE 14 879 - -
Pte2g01712 941 NCBIfam plasma-membrane proton-efflux P-type ATPase 31 803 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte2g01712 941 SUPERFAMILY Calcium ATPase, transduction domain A 129 226 IPR008250 -
Pte2g01712 941 Gene3D - 890 941 - -
Pte2g01712 941 PRINTS P-type cation-transporting ATPase superfamily signature 480 491 - -
Pte2g01712 941 PRINTS P-type cation-transporting ATPase superfamily signature 326 340 - -
Pte2g01712 941 PRINTS P-type cation-transporting ATPase superfamily signature 176 190 - -
Pte2g01712 941 PRINTS P-type cation-transporting ATPase superfamily signature 502 512 - -
Pte2g01712 941 PRINTS P-type cation-transporting ATPase superfamily signature 585 604 - -
Pte2g01712 941 PRINTS P-type cation-transporting ATPase superfamily signature 608 620 - -
Pte2g01712 941 FunFam Plasma membrane ATPase 479 633 - -
Pte2g01712 941 Pfam E1-E2 ATPase 128 305 - -
Pte2g01712 941 SFLD p-type atpase 308 636 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01712 Pte-Chr2 36649152 36653266 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01712 14 942 Primary Pumps ATPases AT3G42640 84.120 0.0 1602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01712 K01535 - jre:109001016 1589.32