LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g01712	ATGTTCATTTTAACATGCAAATACGTTTGTGTATGGCAGGAGCATATCCCAGTTGATGAAGTGTTTAAGCAACTGAAATGCAGCAGACAGGGTTTGACAAAAGAGGAGGGAGAGAAAAGGCTTCAGATCTTTGGCCCTAATAAGCTTGAGGAGAAAAAGGACAGCAAGATTCTGAAGTTCTTAGGGTTCATGTGGAATCCTCTCTCATGGGTTATGGAGGCTGCAGCCATCATGGCCATTGCTTTGGCCAATGGAGGGGGCAAGGCACCGGACTGGCCTGATTTTGTTGGCATCGTAGTATTGTTATTCATCAACTCAACCATCAGCTTTATCGAAGAAAACAATGCTGGCAATGCAGCTGCTGCTTTGATGGCGGGTCTTGCACCCAAAACCAAGGTGTTGAGGGATGGTAAATGGTGTGAGGAAGAAGCAGCAATACTGGTACCGGGAGATGTCATCAGCATCAAGCTCGGAGACATTGTCCCAGCTGATGCTCGTCTCCTGGAGGGAGATCCACTCAAGATTGACCAGGCAGCTCTCACTGGTGAGTCATTGCCAGTCACCAGAAACCCAGGAGATGAGGTCTTCTCAGGCTCTACTTGCAAACAGGGTGAGATCGAAGCTGTTGTTATCGCAACTGGTGTCCATACTTTCTTTGGCAAGGCTGCTCACCTTGTGGACAGCACCAACCAAGTTGGTCATTTCCAGAAGGTGTTAACAGCCATTGGCAATTTCTGCATCTGCTCGATTGCTGCGGGAATGGTGATTGAAATCTTAGTGATTTACCCAGTCCAGAAAAGGCCTTATAGGGAAGGAATTGACAACTTGCTGGTGCTTTTGATTGGAGGTATCCCAATTGCCATGCCAACTGTTTTGTCTGTGACCATGGCTATTGGGTCTCACCGCTTGTCTCAGCAAGGTGCCATCACCAAGAGGATGACAGCTATAGAGGAAATGGCAGGAATGGACGTCCTTTGCAGTGACAAAACTGGAACTCTCACCCTCAACAAGCTTACTGTGGACAAGAATCTAATTGAGGTGTTTCCTAAGGACGTGGATAGAGATGCTCTTGTCTTGTACTCTGCTAGGGCATCTAGGGTAGAAAACCAAGATGCCATTGATGCATCAATTGTGGGAATGTTGGCTGATCCCAAGGAGGCTAGAGCTGGAATCACCGAGGTGCACTTTTTGCCCTTCAACCCCGTCGAGAAACGCACAGCAATTACCTACATCGACTCTAATGGTGATTGGCACAGGTCCAGCAAGGGTGCTCCTGAGCAAATAATTGAACTTTGCCAACTCCAAGGAGAGACATTGAAAAAGGCCCATCATATCATCGACCAATATGCTGAACGTGGTCTTCGTTCCTTGGGTGTTGCCAGACAGACCGTTCCAGAGAAATCCAAGGAGAGCGCCGGAGAACCATGGGAGTTCTTGGGTCTCTTGCCCCTCTTTGATCCTCCAAGGCATGATAGTGCAGAGACCATCCGCAGAGCCCTTGAACTTGGTGTTAATGTTAAGATGATAACTGGTGATCAACTTGCCATTGGAAAAGAAACCGGACGTAGACTTGGTATGGGCACCAATATGTACCCATCATCTTCTCTTCTTGGTCAGACTAAGGATGAAGCTATTGCTTCAATGCCCATTGATGAGCTTATTGAGAAGGCCGATGGTTTCGCTGGAGTTTTCCCAGAGCACAAATATGAGATCGTCAAGAGGTTGCAGGACAAGAAGCACATTGTTGGGATGACTGGTGATGGTGTCAACGATGCCCCTGCACTGAAGAAGGCAGACATTGGTATTGCAGTTGCTGATGCTACCGATGCAGCAAGGAGTGCTTCTGACATTGTCTTGACAGAACCAGGTCTAAGTGTGATCATTAGTGCTGTGCTCTCAAGCAGGGCCATCTTCCAGAGGATGAAGAACTATACAATCTATGCTGTTTCCATCACAATTCGTATTGTGCTTGGTTTCATGCTTGTTTCCCTTATCTGGAAGTTTGACTTCTCACCTTTCATGGTTCTCGTCATTGCCATCTTGAATGATGGAACCATCATGACCATCTCTAAGGATAGAGTGAAACCATCTCCTTTGCCTGACTCATGGAAGCTTGGAGAAATCTTTGGTACTGGAATCGTCCTTGGGGCCTACATGGCAATCATGTCTGTTATTTTCTTCTATCTCGTCCATGACACTGACTTCTTCACAGAATCATTCGGTGCAAGACCATTGAAGCATGACTCTGAAGAGCTCAACTCAGCATTGTACCTTCAAGTGAGTATCATTAGTCAAGCTTTGATCTTCGTGACGAGATCAAGGAGTTGGTCATTCATGGAACGTCCTGGTTTGTTGCTTGTCGGAGCCTTCTTTGCAGCACAACTGGTGGCCACTCTCATTGCTGTCTATGCACACATGGAATTTGCCAGAGTCAAGGGAATTGGCTGGGAATGGGCAGGAATTATTTGGCTGTACAGCCTTGTGACATACATACCTCTTGATATTCTCAAGTTTGTCATCCGCTATGCTTTGAGTGGCAAGGCATGGGACAACCTTCTTGAGAAGACTGCTTTCACAAGCAAGAAGGATTATGGAAAGGGAGAGAGGGAGGCACAATGGGCCACAGCACAACGTACATTGCATGGTCTCCATTCCTCAGAAGGTGACAAGAACTACAAAGAGCTCTCTGAAGTTGCCGAGCAGGCAAAGAAGCGAGCTGAGATCTCTAGGCTGAGAGAGCTTCATACTCTAAAGGGACATGTTGAATCAGTAGTGAAGCTCAAGGGATTGGACATTGAGACCATCCAGCAACATTACACTGTTTAA	2826	0.4689	MFILTCKYVCVWQEHIPVDEVFKQLKCSRQGLTKEEGEKRLQIFGPNKLEEKKDSKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKAPDWPDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEEEAAILVPGDVISIKLGDIVPADARLLEGDPLKIDQAALTGESLPVTRNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAAGMVIEILVIYPVQKRPYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPKDVDRDALVLYSARASRVENQDAIDASIVGMLADPKEARAGITEVHFLPFNPVEKRTAITYIDSNGDWHRSSKGAPEQIIELCQLQGETLKKAHHIIDQYAERGLRSLGVARQTVPEKSKESAGEPWEFLGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQTKDEAIASMPIDELIEKADGFAGVFPEHKYEIVKRLQDKKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLSSRAIFQRMKNYTIYAVSITIRIVLGFMLVSLIWKFDFSPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLGEIFGTGIVLGAYMAIMSVIFFYLVHDTDFFTESFGARPLKHDSEELNSALYLQVSIISQALIFVTRSRSWSFMERPGLLLVGAFFAAQLVATLIAVYAHMEFARVKGIGWEWAGIIWLYSLVTYIPLDILKFVIRYALSGKAWDNLLEKTAFTSKKDYGKGEREAQWATAQRTLHGLHSSEGDKNYKELSEVAEQAKKRAEISRLRELHTLKGHVESVVKLKGLDIETIQQHYTV*	942

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte2g01712	941	Gene3D	-	323	622	IPR023214	-
	Pte2g01712	941	Pfam	Cation transporter/ATPase, N-terminus	15	78	IPR004014	-
	Pte2g01712	941	PRINTS	H+-transporting ATPase (proton pump) signature	757	778	IPR001757	GO:0005215\|GO:0005524\|GO:0016020\|GO:0016887
	Pte2g01712	941	PRINTS	H+-transporting ATPase (proton pump) signature	442	460	IPR001757	GO:0005215\|GO:0005524\|GO:0016020\|GO:0016887
	Pte2g01712	941	PRINTS	H+-transporting ATPase (proton pump) signature	616	641	IPR001757	GO:0005215\|GO:0005524\|GO:0016020\|GO:0016887
	Pte2g01712	941	PRINTS	H+-transporting ATPase (proton pump) signature	585	601	IPR001757	GO:0005215\|GO:0005524\|GO:0016020\|GO:0016887
	Pte2g01712	941	PRINTS	H+-transporting ATPase (proton pump) signature	557	573	IPR001757	GO:0005215\|GO:0005524\|GO:0016020\|GO:0016887
	Pte2g01712	941	Gene3D	-	129	213	-	-
	Pte2g01712	941	FunFam	Plasma membrane ATPase	338	485	-	-
	Pte2g01712	941	FunFam	ATPase 4 plasma membrane-type	572	812	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g01712	Pte-Chr2	36649152	36653266	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte2g01712	14	942	Primary Pumps ATPases	AT3G42640	84.120	0.0	1602

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g01712	K01535		-	jre:109001016	1589.32

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