Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01706 ATGGTTTTGATAGAAGAGAAAAACGACCATCCTCTTCCAAAATCGGTGCCAGAAACGTCAAAGTCTGTTATTCCCGAGTTTCACAAAGAACCCGCCTCCGATGGGTATGAAACTGCCAGTGACGGAGAACTTGCCACCGAAGATGGCGATCATAGAGATAAAAGCGAAGAAAAAAAGCCATCGCAACAACAGGACCAAGAAGTAGAGCAACAAAATAGCGTTCCTTTGATGACGGAGTCTCCGGGGGACATTGATAGTGAGGACGAAACCAAACAGGAAGCGTTAGCGCAAGCCAATAATGCAAAAGTTGAAGGCAATAATATGTTTGCAAGCGGACAGTATGAGGACGCATTGTTAAAATATGAGCTCGCCTTACAAGTTGCACCTGAGATGCCTGCTTCTGTTGAGTTACGTTCAATATGTCATTCGAACCGTGGCATATGCTTTCTGAAAATGGGAATGTATGAGGAGACCGTCAAAGAATGCACAAAAGCTTTGGAATTGAATCCTTCTTACATCAAAGCTTTGGTGAGAAGAGGAGAGGCTCAAGAAAAGCGTGAACATTATGAGGAGGCCATTGCCGATATGAAAAGAATCTTAGAACTTGATCCTTCAAATGCTCAAGCTATGAAAACTATTCGGCGTTTGCAGCCCCTGGCTGATGAAAAAAGGGAAAAGATGAAGGAAGAAATGATTGGAAAGCTAAAAGAGATGGGGAACTCTTTGTTGGGTCGCTTTGGGATGAGCGTTGACAACTTCAAAGCTGTAAAAGATCCAAACACCGGTTCCTATTCTATTTCATTCCAAAAATGA 813 0.4293 MVLIEEKNDHPLPKSVPETSKSVIPEFHKEPASDGYETASDGELATEDGDHRDKSEEKKPSQQQDQEVEQQNSVPLMTESPGDIDSEDETKQEALAQANNAKVEGNNMFASGQYEDALLKYELALQVAPEMPASVELRSICHSNRGICFLKMGMYEETVKECTKALELNPSYIKALVRRGEAQEKREHYEEAIADMKRILELDPSNAQAMKTIRRLQPLADEKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01706 270 ProSiteProfiles TPR repeat profile. 173 206 IPR019734 GO:0005515
Pte2g01706 270 SUPERFAMILY TPR-like 97 226 IPR011990 GO:0005515
Pte2g01706 270 MobiDBLite consensus disorder prediction 65 79 - -
Pte2g01706 270 Gene3D Tetratricopeptide repeat domain 85 232 IPR011990 GO:0005515
Pte2g01706 270 MobiDBLite consensus disorder prediction 1 91 - -
Pte2g01706 270 Coils Coil 84 104 - -
Pte2g01706 270 SMART tpr_5 94 131 IPR019734 GO:0005515
Pte2g01706 270 SMART tpr_5 173 206 IPR019734 GO:0005515
Pte2g01706 270 SMART tpr_5 139 172 IPR019734 GO:0005515
Pte2g01706 270 Coils Coil 179 199 - -
Pte2g01706 270 MobiDBLite consensus disorder prediction 44 64 - -
Pte2g01706 270 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 47 270 - -
Pte2g01706 270 Pfam Tetratricopeptide repeat 174 206 IPR013105 -
Pte2g01706 270 Pfam Tetratricopeptide repeat 141 172 IPR001440 GO:0005515
Pte2g01706 270 ProSiteProfiles TPR repeat profile. 139 172 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01706 Pte-Chr2 36518239 36522118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01706 85 229 Calmodulin-binding Proteins AT3G25230 33.333 1.66e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01706 K24926 - qsa:O6P43_022248 342.043