Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01695 ATGTCAGGAGAGGAAGCACCCGTCCAAGTTGAGGCAGCCCCAGTTGCTGTACCTGTTGAAGATCTAGACATCGAAAAGGCCTTGGAACTTGTACTAAGGAAATCTAACGCTTATGGGGGTCTAGCAAGAGGACTCCATGAAGGTGCCAAGGCCATTGAAAAGCGCACTGCATTTCTCTGTGTTTTAGCTGAGGACTGTGATGAGCAAAATTATGTTAAATTGGTGAAAGCACTTTGTGCTGAACACAACATTGATCTGTTTACAGTACCTAGTGCAAAAACTCTTGGAGAGTGGGCTGGTTTGTGTAAGATTGACTCCGAAGGAAAGGCCCGAAAGGTGGTAGGTTGCTCCTGCGTTGTTGTCAAGGACATTGGGGAGCAGACACCTGCTTCTGATTTCATCAAGAATAGGAAGTCTGAGTAG 423 0.4634 MSGEEAPVQVEAAPVAVPVEDLDIEKALELVLRKSNAYGGLARGLHEGAKAIEKRTAFLCVLAEDCDEQNYVKLVKALCAEHNIDLFTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDIGEQTPASDFIKNRKSE* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01695 140 FunFam 40S ribosomal protein S12 5 140 - -
Pte2g01695 140 Gene3D - 8 139 IPR029064 -
Pte2g01695 140 ProSitePatterns Ribosomal protein S12e signature. 27 45 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pte2g01695 140 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 27 120 IPR004038 -
Pte2g01695 140 PANTHER 40S RIBOSOMAL PROTEIN S12 16 137 - -
Pte2g01695 140 SUPERFAMILY L30e-like 23 137 IPR029064 -
Pte2g01695 140 PRINTS Ribosomal protein S12E family signature 31 44 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pte2g01695 140 PRINTS Ribosomal protein S12E family signature 86 107 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pte2g01695 140 PRINTS Ribosomal protein S12E family signature 111 124 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pte2g01695 140 PRINTS Ribosomal protein S12E family signature 45 61 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01695 Pte-Chr2 36253191 36257190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01695 20 135 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 73.276 3.94e-60 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01695 K02951 - gmx:100500093 190.274