Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01689 ATGCAATTAAAGCCCGAGTATCAGAGAATGGCTTTGTTTCGTAAATTGTTCTATAGAAAACCACCGGACGGCCTTCTTGAGATTTGTGAAAGAGTTTACGTTTTTGACTGCTGCTTCGCCACTAATGCTTGGAAGGAAGAAAACTACAGAGGCTACATGGGAGGGATAGTTAGCCATTTTCAAGAAAATTTATCGGATGCTTCAATTTTGGTGTTCCATTTTGGTGAGAAGAGTAAAGAGAGCCACATGGCAAATGCCTTGTCTGAGTATGATCTTACTATCATGGACTATCCTATGCACTATGAAGACTGCCCGTTGCTTAAGATGGAGGTCATCCATCATTTTTTGAGGTCAAGTGAGAGTTGGCTTTCTCTTAGCCGGAATAATGTGCTGATTATGCACTGTGAACGTGGGGGCTGGCCAATTTTATGTTTCATGCTTGCTGCACTACTGATTTATAGGAAGCAAAATAGTGGGGAGCAGAGGACCTTGGATATGATTTACAAGCAGGCTCCGCTTGAGCTTTTACAATTTCTATCACCATTAAATCCAATCCCTTCCCAGTTGAGGTATCTGCAGTATATCTCAAGGAGGAATGTTGCTTTTGATTGGCCTCCAATGGACAGGGCACTCACTTTGGACTGCATCATTCTTAGATTTATCCCCAACTTCGATGCGGTTGGTGGTTGTCGACCGATATTCCGAATATACGGACAAGATCCATTTATTTGTACTGATAGAAGAGTCAAAGTTTTGTTCTCAACGTCCAAAAGAAGCAAAGCTGTACGATCTTACAAACAGGCAGAATGCGAACTAATAAAGTTTGACATGAATTGCCATATACAAGGTGATATTGTGGTGGAGTGCATTAGCTTAAGTGATGATCTGGAACATGAGATGATGATGTTCAGGGTCATGTTCAACACAGCTTTCATTAGGTCTAATGTATTGATTCTTAACCGCGATGAAATTGATACACTATGGGATGCTAAGGATCGTTTCCCAAAGGATTTTAGAGCAGAGATTCTTTTATCAGACATGGATGCTACTGCTTGTGTCATCGCAAATGACTATTCGTGTTTTGAGGAAGAGGGCTGCCCTATAGAAGGTTATTCCAAAGTTGAAGATATTTTTAACCCTGTGGATTGGTTGGATAATTCGTTAGATATTGCGCTTAAGGCAATGCCGCAGATGAATGCCTCAGACACAGTTCATCAAAAGTTGGATACATCTTCTCATCAGTTTCCAGTAGCTACATCTGCAGTGCCACAAACAGCTGTTAATGTATTTCAGGGGAAAATGAGGCTAGCAGTTTCAAATGATGATGGTAACAAGTCTTCATCCCGAACTTTGGAAATTTGTAGCAAGCAGAGGCCTAAACAATATTCTGGTAATGATGTGGATGAAAAGCTGAATCAGTCCGTTGGTATCAGCTCTATTCTTCAAGAACCCAATACTCCTGAAACCATCTGTGGGAAATGGCCCGAAGCTTCTCGGGAAACAATGCAATCTGACGTTGCCTTACCTGAACACATGGATATCACTTCTCCACTATGTGCATCTGCCTATGTTCCCACTCAAACCATATCAACATCTGATACAACTAAATTGATAGATAATTCTGTTTCTTTTTCACCAAAAACACCTCCTCCACCACCTCCTCTACGTCCTTTGTTGACCTCTGGCGTTAGAAAAGCTAACTATTCCCCCTTCCTGCAGTCGCCATCTCCACCAACACCAACTCCTGCACCTTATTATCATTCAGCTTTAAACCATGAACAGATTTCAGTTATTGAAGATGATGTTATTCATTTTCAGAATTGTTGTTCATCAACTTTAAGTTCCACAGATGAGACTCTACAATCGAATGTCACATCAAACAAGTTGTTGTGTACTTCTGTGTCATATACTGACTTTGTGTTGTCACATAAGACCTCACCACCTCCCACGCCTCCTCCTCCTCCAACACCTCCCATAAAGGATAACGTACCTATTAGAGAAGAACCACCTCCACCTCCATCCCCTGCATCTATAAATGAGGAGATCCCTGTTAAAACTGCACCTTTTCCACCCCCACCACCTCCTATTAAGGAGGAGTACCATGTTAAAACTGGGCGTCCTCCACCCCCACCCCCTCCGACAAAGGAGAAGATCAGTGTTAAAACTGTACCTACTCCACCCCCTCCACCTCCAATAATGCAGGGGCATGTTGAAACTGGGCCTTCTCCTTCCCCAGCGCCTATAGAGGAGAAGATCCCTGTTGAAACTGCACCTCCTCCACCCCCACCACTTCCTATAAAGGAGGAGAACCCTGTTAAAACTGCACCTCCTCCACCCCTACCACCTCCCACAAAAGAGGAGATCTCTGTTAAAACCGCACCTCCTCCACCCCCACCACCTCCAGTAACGCAGGAGAACCATGTTAAAACTGGGCCTCCTCCACCCCCACCACCATCTCATCTTTCAGGGCAAGCTAAAAGTCACGTAACCTCATCCTCTTCTTCTGCACCACCACCTCCTCCTGCCCCTATTGGTAAAGGAGGTTTAATGGGCAATAGTGCAGGACCCAGTGCAAGGGGACAGGTTTTGTCAAAAATAATGACTTCAAGCAAAAACCAGAACAAAAAATTGAAGCCATTGCATTGGTTGAAGTTATCAAGAGCAGTACATGGAAGCTTATGGGCTGAGGCGCAGAAGTCTGGCGATACCTCCTTGGCTCCTGAGATTGATTTTTCAGAACTTGAAAGTCTCTTTTCAGCAGCAGTTACAAACGATGCAAACAAGAAAAAGTCAAATACTCGACAATCAGTTGCACCGAAATCTGAGAAAGTGCAACTGATTGAGCACAGGCGTGCATATAATTGTGAAATTATGCTTTCGAAAGTGAAAGTCCCCTTGCATGATCTGGCGAGCTCTGTGCTTTCCCTGGAAGATTCGGCCATGGACACCGACCAAGTTGAGAATCTCATAAAGTTTTGTCCTACAAAAGAGGAGATGGAACTACTCAAGGGATACACGGGAGACAAGGAGAAGTTGGGGAAATGTGAGCAGTTTTTCCTAGAATTAATGAAAGTGCCACGGGTAGAATCAAAACTTAGAGTTCTTCTGTTCAAGAAACAGTTCCATAGCCAGGTTTCTGATCTTAGAAAAAGTCTTGAAGCTGTGAACTTTTCTGTAGATGAGATCCGCAATTCTGTCAAATTGAAGAGAATAATGCAAACGATTCTTTCTCTTGGAAATGCCTTGAACGAAGGAACTGCCAGGGGCTCTGCTGTTGGATTCAGATTAGATAGCCTGCTTAAACTCACAGATACACGTGCACAGAACAACAAGATGACTCTCATGCATTACCTTTGTAAGGTTCTCGTTGATAAACTCCCAGAAGTTCTGGATTTTTCCAAGGACCTTCAACACTTAGAACCTGCAGCAAAGGTACAGCTGAAATTTTTGGCAGAGGAGATGCAAGCTATAAGCAAAGGGTTGGAGAAAGTTATTCAGGAACTGTCAACATCTGAAAGTGATGGTCCTATATCGGATAACTTCAGGAAGACCTTGAAAGAGTTTCTCTGCCTTGCAGAAGCGGAAGTCAACTTGCTGACTTCTTTATATTCTGAAGTGGGGAGAAATGTGGATGCATTGATTCTCTATTTTGGAGAAGATCCATCTCGATCGCCTTTTGAACAAGTGGTTGCAACTTTGCTAAACTTCGTTAGAATGTTCAAGAAATCCCATGAAGAGAATTGTAAGCAGCTAGAGCAAGAAATGAAAAAAGGAACAGCCAGTGAAAAGTTGAATATAGGGGCTTCACATTGTGAATCTGAACAATTGTTACGTACTGTAATCGAGAGTGGCAGTGTCAAGTAA 3864 0.4301 MQLKPEYQRMALFRKLFYRKPPDGLLEICERVYVFDCCFATNAWKEENYRGYMGGIVSHFQENLSDASILVFHFGEKSKESHMANALSEYDLTIMDYPMHYEDCPLLKMEVIHHFLRSSESWLSLSRNNVLIMHCERGGWPILCFMLAALLIYRKQNSGEQRTLDMIYKQAPLELLQFLSPLNPIPSQLRYLQYISRRNVAFDWPPMDRALTLDCIILRFIPNFDAVGGCRPIFRIYGQDPFICTDRRVKVLFSTSKRSKAVRSYKQAECELIKFDMNCHIQGDIVVECISLSDDLEHEMMMFRVMFNTAFIRSNVLILNRDEIDTLWDAKDRFPKDFRAEILLSDMDATACVIANDYSCFEEEGCPIEGYSKVEDIFNPVDWLDNSLDIALKAMPQMNASDTVHQKLDTSSHQFPVATSAVPQTAVNVFQGKMRLAVSNDDGNKSSSRTLEICSKQRPKQYSGNDVDEKLNQSVGISSILQEPNTPETICGKWPEASRETMQSDVALPEHMDITSPLCASAYVPTQTISTSDTTKLIDNSVSFSPKTPPPPPPLRPLLTSGVRKANYSPFLQSPSPPTPTPAPYYHSALNHEQISVIEDDVIHFQNCCSSTLSSTDETLQSNVTSNKLLCTSVSYTDFVLSHKTSPPPTPPPPPTPPIKDNVPIREEPPPPPSPASINEEIPVKTAPFPPPPPPIKEEYHVKTGRPPPPPPPTKEKISVKTVPTPPPPPPIMQGHVETGPSPSPAPIEEKIPVETAPPPPPPLPIKEENPVKTAPPPPLPPPTKEEISVKTAPPPPPPPPVTQENHVKTGPPPPPPPSHLSGQAKSHVTSSSSSAPPPPPAPIGKGGLMGNSAGPSARGQVLSKIMTSSKNQNKKLKPLHWLKLSRAVHGSLWAEAQKSGDTSLAPEIDFSELESLFSAAVTNDANKKKSNTRQSVAPKSEKVQLIEHRRAYNCEIMLSKVKVPLHDLASSVLSLEDSAMDTDQVENLIKFCPTKEEMELLKGYTGDKEKLGKCEQFFLELMKVPRVESKLRVLLFKKQFHSQVSDLRKSLEAVNFSVDEIRNSVKLKRIMQTILSLGNALNEGTARGSAVGFRLDSLLKLTDTRAQNNKMTLMHYLCKVLVDKLPEVLDFSKDLQHLEPAAKVQLKFLAEEMQAISKGLEKVIQELSTSESDGPISDNFRKTLKEFLCLAEAEVNLLTSLYSEVGRNVDALILYFGEDPSRSPFEQVVATLLNFVRMFKKSHEENCKQLEQEMKKGTASEKLNIGASHCESEQLLRTVIESGSVK* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01689 1287 Gene3D Formin, FH2 domain 865 1252 IPR042201 -
Pte2g01689 1287 MobiDBLite consensus disorder prediction 540 561 - -
Pte2g01689 1287 MobiDBLite consensus disorder prediction 705 736 - -
Pte2g01689 1287 MobiDBLite consensus disorder prediction 440 467 - -
Pte2g01689 1287 Pfam C2 domain of PTEN tumour-suppressor protein 208 345 IPR014020 -
Pte2g01689 1287 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 210 347 IPR035892 -
Pte2g01689 1287 ProSiteProfiles Formin homology-2 (FH2) domain profile. 867 1266 IPR015425 -
Pte2g01689 1287 SUPERFAMILY Formin homology 2 domain (FH2 domain) 813 1257 - -
Pte2g01689 1287 ProSiteProfiles C2 tensin-type domain profile. 208 347 IPR014020 -
Pte2g01689 1287 SMART it6_source 867 1285 IPR015425 -
Pte2g01689 1287 MobiDBLite consensus disorder prediction 439 467 - -
Pte2g01689 1287 Gene3D - 205 350 - -
Pte2g01689 1287 SMART PTEN_C2_2 206 346 IPR014020 -
Pte2g01689 1287 MobiDBLite consensus disorder prediction 642 860 - -
Pte2g01689 1287 Coils Coil 1241 1261 - -
Pte2g01689 1287 MobiDBLite consensus disorder prediction 746 821 - -
Pte2g01689 1287 MobiDBLite consensus disorder prediction 645 678 - -
Pte2g01689 1287 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 21 196 IPR029021 -
Pte2g01689 1287 PANTHER FORMIN-J 741 1264 - -
Pte2g01689 1287 Gene3D Protein tyrosine phosphatase superfamily 17 200 IPR029021 -
Pte2g01689 1287 Pfam Formin Homology 2 Domain 870 1241 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01689 Pte-Chr2 36017895 36029004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01689 830 1263 Protein tyrosine phosphatase (PTP) family AT5G58160 67.972 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01689 - - aprc:113848377 1294.26