Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01680 ATGGAGAAGAGAGAACCAGAGATCAAATCTACAGAGAATCCAATGGCAACTTCTACTGTATTTTCCGATGATATTCCGACCAATAATGTCTCTATGTCAAATATCTTGTACGACATGTCATGTGGTGATCAATATGAAAAGGGTCCATTTGGGTACATGGAATGGCCGGCCGGCCAAGACTATGTTCCTTCGTCTTTATTCGATTGGCTTCCACTGCCCACAACCGCAACCACGTCGTCTTCCATGATTCTTCAACAGGCGCAGCAGCTTCTATCTCCGGTTACCTCTACAGTGCCTGAATCTTCTGAGGTGTTGAACGCCCCTACCTCCGCTAATACTTCTTCCATTTCTTCCTCTTCAAATGAAGCCCCTGTGGCAAATACCGATGAGCTTCACAGCAATAGCAAAAATGAGACTGAGCAAGACGAAGTAGTAGAAGGTGGAGCAGATGAAGACAAGGCTAAAAAACAGTTGAAACCCAAAAAGAAGAACCAAAAAAGGCAAAGAGAACCGAGATTTGCGTTCATGACAAAGACTGATATGGATCTTCTTGACGATGGCTATCGGTGGCGCAAGTACGGCCAAAAAGCTGTCAAGAACAGCCCATATCCCAGGAGCTATTATCGTTGTACCAGTGCTGGTTGCGGCGTGAAGAAGAGGGTGGAGCGGTCCTCTGATGACCCTTCTATTGTCGTTACCACCTATGAAGCCCAACACACGCATCCGAATCCGGTAATACCTCGGAGCTCCAGTTTTGTGTTCGTTCAAGAATCTAGTACAGTTGATGGATTCGAAGCCAACCCAATTTGTTCCAGTTCCTTAGCTTTATCACAACTCAATCAATTACCTCCTCCTCCTCCTCCTCATCATGGTATGTTCCAACAAAAACAAGCAGCAGCTTATTTTTTTAACTCACCACCCTCTTTGAGTTTTACTACAAGTTCAAGTGGCTTAACTCACTCCTCCAGCTTTGTTCATCAAGAAGGTGACTACTTTGGTCCATCTCCATTGTCGAGTACTGATCTAATGTTAAGGGACCATGGACTTCTCGAGGACATACTGCCTTTGCAGATGATCAGTGAGGATTCAAAAGAAGATCATCTGTAG 1107 0.449 MEKREPEIKSTENPMATSTVFSDDIPTNNVSMSNILYDMSCGDQYEKGPFGYMEWPAGQDYVPSSLFDWLPLPTTATTSSSMILQQAQQLLSPVTSTVPESSEVLNAPTSANTSSISSSSNEAPVANTDELHSNSKNETEQDEVVEGGADEDKAKKQLKPKKKNQKRQREPRFAFMTKTDMDLLDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCGVKKRVERSSDDPSIVVTTYEAQHTHPNPVIPRSSSFVFVQESSTVDGFEANPICSSSLALSQLNQLPPPPPPHHGMFQQKQAAAYFFNSPPSLSFTTSSSGLTHSSSFVHQEGDYFGPSPLSSTDLMLRDHGLLEDILPLQMISEDSKEDHL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01680 368 Gene3D WRKY domain 169 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte2g01680 368 ProSiteProfiles WRKY domain profile. 179 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g01680 368 MobiDBLite consensus disorder prediction 101 132 - -
Pte2g01680 368 MobiDBLite consensus disorder prediction 1 22 - -
Pte2g01680 368 FunFam WRKY transcription factor 57 170 244 - -
Pte2g01680 368 Coils Coil 366 368 - -
Pte2g01680 368 SUPERFAMILY WRKY DNA-binding domain 176 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte2g01680 368 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 94 277 IPR044810 GO:0003700
Pte2g01680 368 SMART WRKY_cls 184 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g01680 368 MobiDBLite consensus disorder prediction 133 158 - -
Pte2g01680 368 MobiDBLite consensus disorder prediction 101 172 - -
Pte2g01680 368 Pfam WRKY DNA -binding domain 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01680 Pte-Chr2 35880930 35882624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01680 155 361 WRKY Transcription Factor Family AT5G49520 49.321 2.18e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte2g01680 WRKY 9.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01680 - - qsa:O6P43_021880 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01680 2 35880930 35882624 Pte2g01680 2 35880930 35882624 RCT